RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 C19orf81C9J6K1 198 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 ORC4O43929 436 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 DNAJC6O75061 913 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 PRPF40AO75400 957 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 KIAA0754O94854 1291 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 ATP2B1P20020 1258 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 IL4RP24394 825 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 TNNT3P45378 269 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 YARSP54577 528 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 EPHB3P54753 998 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 SRSF3P84103 164 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 ZBED6P86452 979 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 RBL2Q08999 1139 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 BIRC3Q13489 604 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 PDIA5Q14554 519 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 PREPLQ4J6C6 727 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 FAM133BQ5BKY9 247 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 ODR4Q5SWX8 454 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 MCTP2Q6DN12 878 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 CPLX2Q6PUV4 134 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 TMEM151BQ8IW70 566 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 EFCAB13Q8IY85 973 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 SLC43A3Q8NBI5 491 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 UHMK1Q8TAS1 419 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 SIGLEC10Q96LC7 697 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 TACO1Q9BSH4 297 aaKnown RBP5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 TINF2Q9BSI4 451 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 TRIM7Q9C029 511 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 CNTD2Q9H8S5 307 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 EXOC1Q9NV70 894 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 RABGAP1Q9Y3P9 1069 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 SLC30A1Q9Y6M5 507 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 KIF21BO75037 1637 aa5.44□□□□□ -1.54
HMGB3P9-201ENST00000441799 ADAMTS20P59510 1910 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 RFXAPO00287 272 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 DNAJA2O60884 412 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 TCEA3O75764 348 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCNCP24863 283 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 SMARCA1P28370 1054 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 RWDD2BP57060 319 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 NFKB2Q00653 900 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 AMPD3Q01432 767 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 NSUN2Q08J23 767 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 EIF4A2Q14240 407 aaKnown RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 WTAPQ15007 396 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 INO80DQ53TQ3 878 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 SYCP2LQ5T4T6 812 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 ADGRF1Q5T601 910 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 ZCCHC8Q6NZY4 707 aaKnown RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCDC84Q86UT8 332 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 LRRC49Q8IUZ0 686 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 N4BP2L2Q92802 583 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 SYTL4Q96C24 671 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 FAM81BQ96LP2 452 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 SPAG5Q96R06 1193 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 UIMC1Q96RL1 719 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 ASPNQ9BXN1 380 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 HDAC9Q9UKV0 1011 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 ATP8A1Q9Y2Q0 1164 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 POLR3KQ9Y2Y1 108 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 TMEM98Q9Y2Y6 226 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 PRKAB1Q9Y478 270 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 ATP6V0A2Q9Y487 856 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 PPP2R3BQ9Y5P8 575 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 SQORQ9Y6N5 450 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 MORC2Q9Y6X9 1032 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 WDR97A6NE52 1622 aa5.43□□□□□ -1.54
HMGB3P9-201ENST00000441799 BRD4O60885 1362 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 NUP160Q12769 1436 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 VPS8Q8N3P4 1428 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 HRKO00198 91 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 SGTAO43765 313 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 DIAPH1O60610 1272 aaKnown RBP5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 USP2O75604 605 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 OFD1O75665 1012 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 BAIAP3O94812 1187 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 MYBL2P10244 700 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 VIPR1P32241 457 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 TNNI2P48788 182 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 YBX1P67809 324 aaKnown RBP5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 PPP2R5AQ15172 486 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 PPP2R5BQ15173 497 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 SLC5A9Q2M3M2 681 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 MUM1Q2TAK8 710 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 DBX2Q6ZNG2 339 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 GGNQ86UU5 652 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCDC144CPQ8IYA2 1237 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 TMEFF1Q8IYR6 380 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 FEZF2Q8TBJ5 459 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 TBC1D31Q96DN5 1066 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 DHRS1Q96LJ7 313 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 CCDC74BQ96LY2 380 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 NOC4LQ9BVI4 516 aaKnown RBP5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 ABCG4Q9H172 646 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 VPS33BQ9H267 617 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 CRTAC1Q9NQ79 661 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 CHST12Q9NRB3 414 aa5.42□□□□□ -1.54
HMGB3P9-201ENST00000441799 DIAPH3Q9NSV4 1193 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms