RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TRIM10Q9UDY6 481 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 VAV3Q9UKW4 847 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 MYO6Q9UM54 1294 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 PCDHA2Q9Y5H9 948 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.53□□□□□ -0.56
CPNE1-218ENST00000439806 FER1L6Q2WGJ9 1857 aa11.53□□□□□ -0.56
CPNE1-218ENST00000439806 CTAGE15A4D2H0 777 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 AKR1B10O60218 316 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 FAM13AO94988 1023 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 ABL1P00519 1130 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 CTAGE8P0CG41 777 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 SPATA31C1P0DKV0 1188 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 GAP43P17677 238 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 HNRNPH3P31942 346 aaKnown RBP11.52□□□□□ -0.57
CPNE1-218ENST00000439806 PRELPP51888 382 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 CYP4A11Q02928 519 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 KIF5AQ12840 1032 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 LRCH2Q5VUJ6 765 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 POTEAQ6S8J7 498 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 RRAGAQ7L523 313 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 CTAGE6Q86UF2 777 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 CTAGE4Q8IX94 777 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 TXLNBQ8N3L3 684 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 SMCR8Q8TEV9 937 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-218ENST00000439806 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 FGFBP2Q9BYJ0 223 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 NUCKS1Q9H1E3 243 aaKnown RBP11.52□□□□□ -0.57
CPNE1-218ENST00000439806 KCTD10Q9H3F6 313 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 CEP72Q9P209 647 aa11.52□□□□□ -0.57
CPNE1-218ENST00000439806 IGLV3-22A0A075B6J6 115 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 LRRC53A6NM62 1247 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 EML1O00423 815 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 NKRFO15226 690 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 CHMP2AO43633 222 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 GAS7O60861 476 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 ASNSP08243 561 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 ERCC3P19447 782 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 EIF4A3P38919 411 aaKnown RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 KIF11P52732 1056 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 PSMC6P62333 389 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 ADAM9Q13443 819 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 ARSHQ5FYA8 562 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 LDHDQ86WU2 507 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 ZC3H3Q8IXZ2 948 aaKnown RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 TEKT3Q9BXF9 490 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 WDR11Q9BZH6 1224 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 PDGFDQ9GZP0 370 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-218ENST00000439806 BHMT2Q9H2M3 363 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 PLAGL2Q9UPG8 496 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
CPNE1-218ENST00000439806 EPHB6O15197 1021 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 ATP8B1O43520 1251 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 TACC1O75410 805 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 PRPF6O94906 941 aaKnown RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 KCNA3P22001 575 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 MUTP22033 750 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 NR2F2P24468 414 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 UBXN2AP68543 259 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 CXCL9Q07325 125 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 PPP2R5CQ13362 524 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 TNIP1Q15025 636 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 BRD3Q15059 726 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 KNOP1Q1ED39 458 aaKnown RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 TDRD12Q587J7 1177 aaKnown RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 SFMBT2Q5VUG0 894 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 TRIM59Q8IWR1 403 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 TPH2Q8IWU9 490 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 CYP2W1Q8TAV3 490 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 JDP2Q8WYK2 163 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 BAP1Q92560 729 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 SLC5A5Q92911 643 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 SECISBP2LQ93073 1101 aaKnown RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 ZBED3Q96IU2 234 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 RUSC1Q9BVN2 902 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 PARD6BQ9BYG5 372 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 ZNF341Q9BYN7 854 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 IFIH1Q9BYX4 1025 aaKnown RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 TYW1Q9NV66 732 aaKnown RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 ZNF446Q9NWS9 450 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 PIM2Q9P1W9 311 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 ARHGAP20Q9P2F6 1191 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
CPNE1-218ENST00000439806 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-218ENST00000439806 PCDHA13Q9Y5I0 950 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms