RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PSMD1Q99460 953 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 MYH7BA7E2Y1 1941 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 TRIM37O94972 964 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 PRDX5P30044 214 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 NONOQ15233 471 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■■□ 24.8
PKP4-204ENST00000421462 PEX26Q7Z412 305 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 KCNK18Q7Z418 384 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CCDC197Q8NCU1 140 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 BRIP1Q9BX63 1249 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 SHBGP04278 402 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CHN1P15882 459 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 SLC8A1P32418 973 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CCDC152Q4G0S7 254 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 LRRC55Q6ZSA7 311 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CCDC50Q8IVM0 306 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 MGARPQ8TDB4 240 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 SNX29Q8TEQ0 813 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CHMP6Q96FZ7 201 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 RSRC1Q96IZ7 334 aaKnown RBP18.19■□□□□ 0.5
PKP4-204ENST00000421462 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 BLOC1S4Q9NUP1 217 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CEP72Q9P209 647 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 F8W031 263 aaPredicted RBP18.19■□□□□ 0.5
PKP4-204ENST00000421462 MMEP08473 750 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 KLRK1P26718 216 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 GCKP35557 465 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 MECOMQ03112 1051 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 PTK2Q05397 1052 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 GRB10Q13322 594 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CCDC38Q502W7 563 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 CCT6BQ92526 530 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 STK38LQ9Y2H1 464 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 COL4A3BPQ9Y5P4 624 aa18.19■□□□□ 0.5
PKP4-204ENST00000421462 TIAM2Q8IVF5 1701 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 STXBP3O00186 592 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 PGRMC1O00264 195 aaKnown RBP18.18■□□□□ 0.5
PKP4-204ENST00000421462 UPP2O95045 317 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
PKP4-204ENST00000421462 BIRC3Q13489 604 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 XPO6Q96QU8 1125 aaKnown RBP18.18■□□□□ 0.5
PKP4-204ENST00000421462 CRNKL1Q9BZJ0 848 aaKnown RBP18.18■□□□□ 0.5
PKP4-204ENST00000421462 MTFR1LQ9H019 292 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 DRD4P21917 467 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 CUL1Q13616 776 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 UNC13DQ70J99 1090 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 MAEAQ7L5Y9 396 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 NEK8Q86SG6 692 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 UBA5Q9GZZ9 404 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 PCDHGC5Q9Y5F6 944 aa18.18■□□□□ 0.5
PKP4-204ENST00000421462 MYH1P12882 1939 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 TCERG1LQ5VWI1 586 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 LRIG3Q6UXM1 1119 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 ANKS4BQ8N8V4 417 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 MARCH10Q8NA82 808 aaPredicted RBP18.17■□□□□ 0.5
PKP4-204ENST00000421462 PRCCQ92733 491 aaPredicted RBP18.17■□□□□ 0.5
PKP4-204ENST00000421462 SPDL1Q96EA4 605 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 MLXIPLQ9NP71 852 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.52e-6■■■□□ 18.5
PKP4-204ENST00000421462 NR2E1Q9Y466 385 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 NPHP3-ACAD11A0A0J9YXS1 232 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 CCT8L1PA6NM43 557 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
PKP4-204ENST00000421462 EMC10Q5UCC4 262 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 LRRC34Q8IZ02 419 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 KIF2BQ8N4N8 673 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 CUL5Q93034 780 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 SAP30BPQ9UHR5 308 aaKnown RBP18.17■□□□□ 0.5
PKP4-204ENST00000421462 MAD2L2Q9UI95 211 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 ORC4O43929 436 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 TDP2O95551 362 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 SLC9A1P19634 815 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 PLTPP55058 493 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 TMC3Q7Z5M5 1100 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 GUF1Q8N442 669 aaKnown RBP18.17■□□□□ 0.5
PKP4-204ENST00000421462 MICAL1Q8TDZ2 1067 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 IQCDQ96DY2 449 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 PRMT1Q99873 361 aaKnown RBP18.17■□□□□ 0.5
PKP4-204ENST00000421462 BARHL2Q9NY43 387 aa18.17■□□□□ 0.5
PKP4-204ENST00000421462 NIP7Q9Y221 180 aaKnown RBP eCLIP18.17■□□□□ 0.5
PKP4-204ENST00000421462 SPDYE3A6NKU9 549 aa18.16■□□□□ 0.5
PKP4-204ENST00000421462 ANP32DO95626 131 aa18.16■□□□□ 0.5
PKP4-204ENST00000421462 CCNHP51946 323 aaPredicted RBP18.16■□□□□ 0.5
PKP4-204ENST00000421462 XRCC4Q13426 336 aa18.16■□□□□ 0.5
PKP4-204ENST00000421462 LRRC14Q15048 493 aa18.16■□□□□ 0.5
PKP4-204ENST00000421462 CALCRLQ16602 461 aa18.16■□□□□ 0.5
PKP4-204ENST00000421462 SPTY2D1Q68D10 685 aaPredicted RBP18.16■□□□□ 0.5
PKP4-204ENST00000421462 ZNF622Q969S3 477 aaKnown RBP eCLIP18.16■□□□□ 0.52e-7■□□□□ 10
PKP4-204ENST00000421462 AK8Q96MA6 479 aa18.16■□□□□ 0.5
PKP4-204ENST00000421462 UTP11Q9Y3A2 253 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms