RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PRR16Q569H4 304 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 CCDC186Q7Z3E2 898 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 TRIB2Q92519 343 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 HAS1Q92839 578 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 MRFAP1L1Q96HT8 127 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 MTMR9Q96QG7 549 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 KCNMB3Q9NPA1 279 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 DDX25Q9UHL0 483 aaKnown RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 FAM237AA0A1B0GTK4 181 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 SPATA31C2B4DYI2 1134 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 MSH4O15457 936 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 ARP10275 920 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 ATP2C1P98194 919 aaPredicted RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 TAPT1Q6NXT6 567 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
DDB1-202ENST00000414411 ETNPPLQ8TBG4 499 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 PXYLP1Q8TE99 480 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 TIGD1Q96MW7 591 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
DDB1-202ENST00000414411 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
DDB1-202ENST00000414411 TBX3O15119 743 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 NEMFO60524 1076 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 ATP9AO75110 1047 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 BMP15O95972 392 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 UQCRHP07919 91 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 TGFB3P10600 412 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 CYP2C19P33261 490 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 CTCFP49711 727 aaPredicted RBP11.18□□□□□ -0.62
DDB1-202ENST00000414411 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
DDB1-202ENST00000414411 MTMR1Q13613 665 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 DPCR1Q3MIW9 517 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
DDB1-202ENST00000414411 CCDC62Q6P9F0 684 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 SHC4Q6S5L8 630 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 EEPD1Q7L9B9 569 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 NLRX1Q86UT6 975 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 AOPEPQ8N6M6 819 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 BPIFA3Q9BQP9 254 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 NRBP1Q9UHY1 535 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 PCDHB13Q9Y5F0 798 aa11.18□□□□□ -0.62
DDB1-202ENST00000414411 LAD1O00515 517 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 DHX15O43143 795 aaKnown RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 ZNF865P0CJ78 1059 aaPredicted RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 PRPHP41219 470 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 SYKP43405 635 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 LBX1P52954 281 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 SP2Q02086 613 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 ZRSR1Q15695 479 aaKnown RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 GNPTABQ3T906 1256 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 RESP18Q5W5W9 173 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 ARL6IP4Q66PJ3 421 aaKnown RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 FBXO16Q8IX29 292 aaPredicted RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 SLC5A5Q92911 643 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 FAM20AQ96MK3 541 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 CEP131Q9UPN4 1083 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 ADCY3O60266 1144 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 CUTAO60888 179 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 OR52Z1P0C646 297 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 ELNP15502 786 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 LRMPQ12912 555 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 IL17AQ16552 155 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 CALCRLQ16602 461 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 CCDC144BQ3MJ40 725 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 PRAMEF19Q5SWL8 479 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 KCNV1Q6PIU1 500 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 RAET1EQ8TD07 263 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 GJA10Q969M2 543 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 CDHR1Q96JP9 859 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 SENP7Q9BQF6 1050 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 DDX41Q9UJV9 622 aaKnown RBP11.17□□□□□ -0.62
DDB1-202ENST00000414411 PTPN22Q9Y2R2 807 aa11.17□□□□□ -0.62
DDB1-202ENST00000414411 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
DDB1-202ENST00000414411 PSMD10O75832 226 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 ARIH2O95376 493 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 KCNA2P16389 499 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 NLRP12P59046 1061 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 ITGB3BPQ13352 177 aaPredicted RBP11.16□□□□□ -0.62
DDB1-202ENST00000414411 MAP3K21Q5TCX8 1036 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 B3GNT9Q6UX72 402 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 TRPV1Q8NER1 839 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 SCFD2Q8WU76 684 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 RIT2Q99578 217 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 ZNF577Q9BSK1 485 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 BCAS3Q9H6U6 928 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 BRCA2P51587 3418 aa11.16□□□□□ -0.62
DDB1-202ENST00000414411 CYBAP13498 195 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms