RNA–Protein interactions for RNA: ENST00000410017.5

COPS7B-206, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-206ENST00000410017 NSUN4Q96CB9 384 aaKnown RBP18.06■□□□□ 0.48
COPS7B-206ENST00000410017 TLCD1Q96CP7 247 aa18.06■□□□□ 0.48
COPS7B-206ENST00000410017 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.06■□□□□ 0.483e-7■■■■□ 21.3
COPS7B-206ENST00000410017 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
COPS7B-206ENST00000410017 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
COPS7B-206ENST00000410017 CCDC189A1A4V9 331 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 PGRMC1O00264 195 aaKnown RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 DNA2P51530 1060 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 SLC8A3P57103 927 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 RNASE9P60153 205 aaKnown RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 POLR2FP61218 127 aaKnown RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 KLHL30Q0D2K2 578 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 RIPK1Q13546 671 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 SEPT2Q15019 361 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 SLC35G1Q2M3R5 365 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 ZCWPW2Q504Y3 356 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 CRELD2Q6UXH1 353 aaPredicted RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 RASGEF1CQ8N431 466 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 UBLCP1Q8WVY7 318 aaPredicted RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 CHMP6Q96FZ7 201 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 PNMA5Q96PV4 448 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 LSM14BQ9BX40 385 aaKnown RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 NEUROG2Q9H2A3 272 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 IL17RBQ9NRM6 502 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 FAM114A2Q9NRY5 505 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 BAZ2BQ9UIF8 2168 aaKnown RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 CCT8L1PA6NM43 557 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 CYTH3O43739 400 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 GNA11P29992 359 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 GYG1P46976 350 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 ELF3P78545 371 aaPredicted RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 PARP10Q53GL7 1025 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 CAVIN4Q5BKX8 364 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 TMC3Q7Z5M5 1100 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 FMNL3Q8IVF7 1028 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 CCDC26Q8TAB7 109 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 SCLT1Q96NL6 688 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 PSMD1Q99460 953 aa18.05■□□□□ 0.48
COPS7B-206ENST00000410017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 BCCIPQ9P287 314 aaKnown RBP eCLIP18.05■□□□□ 0.484e-6■□□□□ 11.3
COPS7B-206ENST00000410017 BZW2Q9Y6E2 419 aaKnown RBP18.05■□□□□ 0.48
COPS7B-206ENST00000410017 LAMB1P07942 1786 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
COPS7B-206ENST00000410017 ASAP2O43150 1006 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 CEP104O60308 925 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 TRIM37O94972 964 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 MAGOHP61326 146 aaKnown RBP18.04■□□□□ 0.48
COPS7B-206ENST00000410017 TFAP4Q01664 338 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 EVX2Q03828 476 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 ITIH4Q14624 930 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 ASIC2Q16515 512 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 MYOCDQ8IZQ8 938 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 LRRC57Q8N9N7 239 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 TBC1D22AQ8WUA7 517 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 RAD54LQ92698 747 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 MAGOHBQ96A72 148 aaKnown RBP18.04■□□□□ 0.48
COPS7B-206ENST00000410017 HOOK2Q96ED9 719 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 MTMR9Q96QG7 549 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 XPO6Q96QU8 1125 aaKnown RBP18.04■□□□□ 0.48
COPS7B-206ENST00000410017 C6orf50Q9HD87 102 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 ADAMTS1Q9UHI8 967 aa18.04■□□□□ 0.48
COPS7B-206ENST00000410017 F8W031 263 aaPredicted RBP18.03■□□□□ 0.48
COPS7B-206ENST00000410017 ATP6V1G2O95670 118 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 PDIA5Q14554 519 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 GPIHBP1Q8IV16 184 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 MAB21L3Q8N8X9 362 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 CCDC197Q8NCU1 140 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 LMBR1Q8WVP7 490 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 PACSIN1Q9BY11 444 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 FAM129AQ9BZQ8 928 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.03■□□□□ 0.48
COPS7B-206ENST00000410017 F8VZ95 297 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 RTN2O75298 545 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 CYP2D6P10635 497 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 ANXA13P27216 316 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 DDX42Q86XP3 938 aaKnown RBP eCLIP18.03■□□□□ 0.48
COPS7B-206ENST00000410017 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 ANKS4BQ8N8V4 417 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 CCHCR1Q8TD31 782 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 SPZ1Q9BXG8 430 aa18.03■□□□□ 0.48
COPS7B-206ENST00000410017 PHF20L1A8MW92 1017 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 RAPGEF1Q13905 1077 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 DYMQ7RTS9 669 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 SLFN11Q7Z7L1 901 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 CUL5Q93034 780 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 FAXDC2Q96IV6 333 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 CDK5RAP3Q96JB5 506 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 TXLNGYQ9BZA5 131 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 NOD2Q9HC29 1040 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 BATF3Q9NR55 127 aa18.02■□□□□ 0.48
COPS7B-206ENST00000410017 CFAP73A6NFT4 308 aa18.02■□□□□ 0.47
COPS7B-206ENST00000410017 PPFIA2O75334 1257 aa18.02■□□□□ 0.47
COPS7B-206ENST00000410017 SSBP05455 408 aaKnown RBP eCLIP18.02■□□□□ 0.47
COPS7B-206ENST00000410017 FLT3P36888 993 aa18.02■□□□□ 0.47
COPS7B-206ENST00000410017 CLNS1AP54105 237 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms