RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 SPATA31E1Q6ZUB1 1445 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 GAKO14976 1311 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 MBD5Q9P267 1494 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 PNMA6FA0A0J9YX94 578 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 NEURL1BA8MQ27 555 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SGSM2O43147 1006 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ZMYND10O75800 440 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 IL18RAPO95256 599 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 PDE8BO95263 885 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 LONP1P36776 959 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 MXD4Q14582 209 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 DOK7Q18PE1 504 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CEP68Q76N32 757 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 STK11IPQ8N1F8 1099 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 MYCT1Q8N699 235 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SNX29Q8TEQ0 813 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 RIT1Q92963 219 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ATP2A3Q93084 1043 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 GPRASP2Q96D09 838 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 EDC3Q96F86 508 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 GPR20Q99678 358 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SPATA16Q9BXB7 569 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 DCLK3Q9C098 648 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SLITRK6Q9H5Y7 841 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SLC38A10Q9HBR0 1119 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 LRRC4Q9HBW1 653 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 DNAJC17Q9NVM6 304 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KCTD5Q9NXV2 234 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 AATFQ9NY61 560 aaKnown RBP eCLIP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ABI2Q9NYB9 513 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 BCCIPQ9P287 314 aaKnown RBP eCLIP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 GCC2Q8IWJ2 1684 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ROBO2Q9HCK4 1378 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 NEXMIFQ5QGS0 1516 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 A6NNZ2 444 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 LRRIQ3A6PVS8 624 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 AKR1B10O60218 316 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CUTAO60888 179 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KRT5P13647 590 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 PAMP19021 973 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ARL1P40616 181 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ZNF445P59923 1031 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 EXOSC10Q01780 885 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SRSF11Q05519 484 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ITIH3Q06033 890 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SMARCB1Q12824 385 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 STK3Q13188 491 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TUBB8Q3ZCM7 444 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 USH1GQ495M9 461 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CCDC183Q5T5S1 534 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TAF2Q6P1X5 1199 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TOGARAM2Q6ZUX3 1019 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 GSTA5Q7RTV2 222 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 DYDC1Q8WWB3 177 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CDKL2Q92772 493 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ZNF577Q9BSK1 485 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ELP3Q9H9T3 547 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 BCL2L12Q9HB09 334 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 NLRC4Q9NPP4 1024 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 BZW2Q9Y6E2 419 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ELP1O95163 1332 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ZNF197O14709 1029 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ATG13O75143 517 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TOMM70O94826 608 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KRT3P12035 628 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SMARCA1P28370 1054 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 PHBP35232 272 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 GMPSP49915 693 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 AP2B1P63010 937 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 RESTQ13127 1097 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KRT81Q14533 505 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SF3B3Q15393 1217 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TBC1D10BQ4KMP7 808 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TTC38Q5R3I4 469 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 DCUN1D2Q6PH85 259 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CCDC50Q8IVM0 306 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 HERC6Q8IVU3 1022 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SUGP1Q8IWZ8 645 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 EID3Q8N140 333 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 PANK1Q8TE04 598 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TMEM169Q96HH4 297 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 MXD3Q9BW11 206 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ENTPD7Q9NQZ7 604 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TMEM39AQ9NV64 488 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 SEPT9Q9UHD8 586 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ZBTB21Q9ULJ3 1066 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ZNF510Q9Y2H8 683 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 PCDHB9Q9Y5E1 797 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 UBE4BO95155 1302 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KIF1AQ12756 1690 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CCDC66A2RUB6 948 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 NPM3O75607 178 aaKnown RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 RAD17O75943 681 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 CD19P15391 556 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 RAG1P15918 1043 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 ERCC3P19447 782 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KCNA4P22459 653 aa2.28□□□□□ -2.04
SCN7A-201ENST00000409855 TBXAS1P24557 533 aaPredicted RBP2.28□□□□□ -2.04
SCN7A-201ENST00000409855 KRT9P35527 623 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms