RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PCDH10Q9P2E7 1040 aa25.35■■□□□ 1.65
PTCD3-203ENST00000409783 ZMYND8Q9ULU4 1186 aaPredicted RBP25.35■■□□□ 1.65
PTCD3-203ENST00000409783 H3BRB1 525 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 DDX39AO00148 427 aaKnown RBP25.34■■□□□ 1.65
PTCD3-203ENST00000409783 LGR5O75473 907 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 PTPN11Q06124 597 aaPredicted RBP25.34■■□□□ 1.65
PTCD3-203ENST00000409783 KIAA0753Q2KHM9 967 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 SESTD1Q86VW0 696 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 GJA10Q969M2 543 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 RIT2Q99578 217 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 KATNAL1Q9BW62 490 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 TUT1Q9H6E5 874 aaKnown RBP25.34■■□□□ 1.65
PTCD3-203ENST00000409783 KCNMB3Q9NPA1 279 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 LTBP2Q14767 1821 aa25.34■■□□□ 1.65
PTCD3-203ENST00000409783 TRIM43BA6NCK2 446 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 DCDC2CA8MYV0 355 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 B4GALT4O60513 344 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 CCNT1O60563 726 aaKnown RBP25.33■■□□□ 1.65
PTCD3-203ENST00000409783 PSMD10O75832 226 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 CLTBP09497 229 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 SYN1P17600 705 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 UTP14CQ5TAP6 766 aaKnown RBP25.33■■□□□ 1.65
PTCD3-203ENST00000409783 ABHD15Q6UXT9 468 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 NOSTRINQ8IVI9 506 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 TRIM43Q96BQ3 446 aaPredicted RBP25.33■■□□□ 1.65
PTCD3-203ENST00000409783 NAP1L4Q99733 375 aaKnown RBP25.33■■□□□ 1.65
PTCD3-203ENST00000409783 TRPV6Q9H1D0 765 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 TBX21Q9UL17 535 aa25.33■■□□□ 1.65
PTCD3-203ENST00000409783 EMSYQ7Z589 1322 aa25.33■■□□□ 1.64
PTCD3-203ENST00000409783 TRIP12Q14669 1992 aaPredicted RBP25.33■■□□□ 1.64
PTCD3-203ENST00000409783 IGKV6D-21A0A0A0MT36 114 aa25.32■■□□□ 1.64
PTCD3-203ENST00000409783 B3GNT9Q6UX72 402 aa25.32■■□□□ 1.64
PTCD3-203ENST00000409783 KIAA0355O15063 1070 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 CHMP4BP1P59074 171 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 HIC1Q14526 733 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 FAM47CQ5HY64 1035 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 LARP1BQ659C4 914 aaKnown RBP25.31■■□□□ 1.64
PTCD3-203ENST00000409783 ZNF746Q6NUN9 644 aaPredicted RBP25.31■■□□□ 1.64
PTCD3-203ENST00000409783 POTEDQ86YR6 584 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 HAS1Q92839 578 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 CTAGE1Q96RT6 745 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 TRMT13Q9NUP7 481 aaKnown RBP25.31■■□□□ 1.64
PTCD3-203ENST00000409783 HDAC6Q9UBN7 1215 aa25.31■■□□□ 1.64
PTCD3-203ENST00000409783 TLR3O15455 904 aaKnown RBP25.3■■□□□ 1.64
PTCD3-203ENST00000409783 ITGB8P26012 769 aa25.3■■□□□ 1.64
PTCD3-203ENST00000409783 HOXC8P31273 242 aa25.3■■□□□ 1.64
PTCD3-203ENST00000409783 KRT76Q01546 638 aa25.3■■□□□ 1.64
PTCD3-203ENST00000409783 LRCH2Q5VUJ6 765 aa25.3■■□□□ 1.64
PTCD3-203ENST00000409783 GDF6Q6KF10 455 aaPredicted RBP25.3■■□□□ 1.64
PTCD3-203ENST00000409783 HSCBQ8IWL3 235 aa25.3■■□□□ 1.64
PTCD3-203ENST00000409783 GTF2IRD1Q9UHL9 959 aa25.3■■□□□ 1.64
PTCD3-203ENST00000409783 TBX3O15119 743 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 GAS7O60861 476 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 SUPT20HL2P0C7V6 817 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 PRPF38BQ5VTL8 546 aaKnown RBP25.29■■□□□ 1.64
PTCD3-203ENST00000409783 FAM20AQ96MK3 541 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 TEKT3Q9BXF9 490 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 UNC45AQ9H3U1 944 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 RNPEPQ9H4A4 650 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 SMARCAD1Q9H4L7 1026 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 PRDM5Q9NQX1 630 aaPredicted RBP25.29■■□□□ 1.64
PTCD3-203ENST00000409783 TMEM39AQ9NV64 488 aa25.29■■□□□ 1.64
PTCD3-203ENST00000409783 ZNF215Q9UL58 517 aaPredicted RBP25.29■■□□□ 1.64
PTCD3-203ENST00000409783 MYH9P35579 1960 aaKnown RBP25.28■■□□□ 1.64
PTCD3-203ENST00000409783 CCDC60Q8IWA6 550 aaPredicted RBP25.28■■□□□ 1.64
PTCD3-203ENST00000409783 SMAP1Q8IYB5 467 aaPredicted RBP25.28■■□□□ 1.64
PTCD3-203ENST00000409783 C7orf31Q8N865 590 aa25.28■■□□□ 1.64
PTCD3-203ENST00000409783 FOXD4L1Q9NU39 408 aa25.28■■□□□ 1.64
PTCD3-203ENST00000409783 KAT6AQ92794 2004 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 H3BQV1 296 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 SMIM10L2AP0DMW4 78 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 SMIM10L2BP0DMW5 78 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 TOB1P50616 345 aaPredicted RBP25.27■■□□□ 1.64
PTCD3-203ENST00000409783 GNL2Q13823 731 aaKnown RBP25.27■■□□□ 1.64
PTCD3-203ENST00000409783 PLPPR4Q7Z2D5 763 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 AFAP1L1Q8TED9 768 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 GLG1Q92896 1179 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 ERAP1Q9NZ08 941 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 VAV3Q9UKW4 847 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 PCDHA10Q9Y5I2 948 aa25.27■■□□□ 1.64
PTCD3-203ENST00000409783 ATP2B1P20020 1258 aa25.26■■□□□ 1.63
PTCD3-203ENST00000409783 TRAPPC10P48553 1259 aa25.26■■□□□ 1.63
PTCD3-203ENST00000409783 STAT5BP51692 787 aa25.26■■□□□ 1.63
PTCD3-203ENST00000409783 ZNF200P98182 395 aaPredicted RBP25.26■■□□□ 1.63
PTCD3-203ENST00000409783 MIS18BP1Q6P0N0 1132 aa25.26■■□□□ 1.63
PTCD3-203ENST00000409783 MTMR9Q96QG7 549 aa25.26■■□□□ 1.63
PTCD3-203ENST00000409783 PRKAG2Q9UGJ0 569 aa25.26■■□□□ 1.63
PTCD3-203ENST00000409783 WDR64B1ANS9 1081 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 CYP2C9P11712 490 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 MARK3P27448 753 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 ADAM17P78536 824 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 PTGISQ16647 500 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 MCTP1Q6DN14 999 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 SWSAP1Q6NVH7 229 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 GDF15Q99988 308 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 NOC4LQ9BVI4 516 aaKnown RBP25.25■■□□□ 1.63
PTCD3-203ENST00000409783 TMEM60Q9H2L4 133 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 AZI2Q9H6S1 392 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 DISC1Q9NRI5 854 aa25.25■■□□□ 1.63
PTCD3-203ENST00000409783 MAFBQ9Y5Q3 323 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms