RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 STXBP3O00186 592 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 FOSL2P15408 326 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 GNA11P29992 359 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 CDC27P30260 824 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 CNKSR3Q6P9H4 555 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 ATP6V0A1Q93050 837 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 ZSWIM6Q9HCJ5 1215 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 NAP1L2Q9ULW6 460 aaPredicted RBP16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 NRCAMQ92823 1304 aa16.62■□□□□ 0.25
NIF3L1-205ENST00000409588 GRXCR1A8MXD5 290 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 SMIM10L2AP0DMW4 78 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 SMIM10L2BP0DMW5 78 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 SCG2P13521 617 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 KCNA2P16389 499 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 APOBRQ0VD83 1088 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 IKBKEQ14164 716 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 GRIN2CQ14957 1233 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 UBE2SQ16763 222 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 CEP55Q53EZ4 464 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 NIPA1Q7RTP0 329 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 DHX38Q92620 1227 aaKnown RBP16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 GAS2L1Q99501 681 aaPredicted RBP16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 ZMYND12Q9H0C1 365 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 ERAP1Q9NZ08 941 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
NIF3L1-205ENST00000409588 RSPH10B2B2RC85 870 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 ATP9AO75110 1047 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 RSPH10BP0C881 870 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 PBX2P40425 430 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 KCNJ6P48051 423 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 CLK2P49760 499 aaKnown RBP16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 NUBP1P53384 320 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 FAM43BQ6ZT52 329 aaPredicted RBP16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 MAFAQ8NHW3 353 aaPredicted RBP16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 MYLIPQ8WY64 445 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 ZNF274Q96GC6 653 aaPredicted RBP16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 BCAS3Q9H6U6 928 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 NFASCO94856 1347 aa16.6■□□□□ 0.25
NIF3L1-205ENST00000409588 MEIS1O00470 390 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 SORBS3O60504 671 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 CYP3A4P08684 503 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 IFNAR1P17181 557 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 TCF7P36402 384 aaPredicted RBP16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 SREBF1P36956 1147 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 THPOP40225 353 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 ZNF618Q5T7W0 954 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 TAF2Q6P1X5 1199 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 ANO3Q9BYT9 981 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 JPH1Q9HDC5 661 aaPredicted RBP16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
NIF3L1-205ENST00000409588 GSTTP1A0A1W2PQM5 241 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 RRN3P2A6NIE6 340 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 NBNO60934 754 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 CPA1P15085 419 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 PDIA3P30101 505 aaKnown RBP16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 ZNF76P36508 570 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 SLC26A2P50443 739 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 ADAM17P78536 824 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 GPNMBQ14956 572 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 UTP14CQ5TAP6 766 aaKnown RBP16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 PLPPR4Q7Z2D5 763 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 RSPH3Q86UC2 560 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 CCDC148Q8NFR7 591 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 GLG1Q92896 1179 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 AZI2Q9H6S1 392 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.24
NIF3L1-205ENST00000409588 A0A0C4DFX4 3053 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 TREHO43280 583 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 LGR5O75473 907 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 ZNF200P98182 395 aaPredicted RBP16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 NTRK3Q16288 839 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 PPP2R2DQ66LE6 453 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 TRAF7Q6Q0C0 670 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 NKX2-4Q9H2Z4 354 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
NIF3L1-205ENST00000409588 ATG7O95352 703 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 SEC24BO95487 1268 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 WDR5P61964 334 aaKnown RBP16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 ARHGAP4P98171 946 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms