RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RPA1P27694 616 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 HOXD13P35453 343 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 ZNF76P36508 570 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 CAP2P40123 477 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 CTTNQ14247 550 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 SFR1Q86XK3 245 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 IKZF4Q9H2S9 585 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 ENC1O14682 589 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 SEC31AO94979 1220 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 KCNMA1Q12791 1236 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 ZBED3Q96IU2 234 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 TSG101Q99816 390 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 BHMT2Q9H2M3 363 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 BMP2KQ9NSY1 1161 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 ARHGAP20Q9P2F6 1191 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 HDAC6Q9UBN7 1215 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
SCAMP4-202ENST00000409472 LRRC53A6NM62 1247 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 CYP3A4P08684 503 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 MYBP10242 640 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 INPP5BP32019 993 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 RETREG2Q8NC44 543 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 EIF2AK1Q9BQI3 630 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 A0A1W2PQJ5 194 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 CTAGE9A4FU28 777 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 FKBP3Q00688 224 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 CCDC40Q4G0X9 1142 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 FIGNQ5HY92 759 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 BAP1Q92560 729 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 SECISBP2LQ93073 1101 aaKnown RBP16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 CRACR2AQ9BSW2 395 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 WRAP73Q9P2S5 460 aaPredicted RBP16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 CDC23Q9UJX2 597 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
SCAMP4-202ENST00000409472 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 KCNA1Q09470 495 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 CCDC122Q5T0U0 273 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 SYT2Q8N9I0 419 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 FAM20AQ96MK3 541 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 NAPGQ99747 312 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 ABCB11O95342 1321 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 SFI1A8K8P3 1242 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 AMPD2Q01433 879 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 LDHDQ86WU2 507 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 AGBL3Q8NEM8 1001 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 ERMNQ8TAM6 284 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 ST7Q9NRC1 585 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 COL20A1Q9P218 1284 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 DNM3Q9UQ16 869 aa16.78■□□□□ 0.28
SCAMP4-202ENST00000409472 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 PRPF6O94906 941 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 POLR2MP0CAP2 368 aa16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 ARP10275 920 aa16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 RRAGAQ7L523 313 aa16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 JAKMIP2Q96AA8 810 aa16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 DYDC2Q96IM9 177 aa16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 NLRC4Q9NPP4 1024 aa16.77■□□□□ 0.28
SCAMP4-202ENST00000409472 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 PSMD10O75832 226 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 NOL4O94818 638 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 ATP1A1P05023 1023 aaKnown RBP16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 CHMP4BP1P59074 171 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 RASA3Q14644 834 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 BMS1Q14692 1282 aaKnown RBP16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 LRCH2Q5VUJ6 765 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 OTOP1Q7RTM1 612 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 KIAA1328Q86T90 577 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 FAM83AQ86UY5 434 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 IL31RAQ8NI17 732 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 RASSF4Q9H2L5 321 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 PLAGL2Q9UPG8 496 aa16.77■□□□□ 0.27
SCAMP4-202ENST00000409472 ZNF536O15090 1300 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 PHF20L1A8MW92 1017 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 EIF3CLB5ME19 914 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 NFIBO00712 420 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 TBC1D12O60347 775 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 FKBP1CQ5VVH2 108 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 MCTP2Q6DN12 878 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 SRGAP1Q7Z6B7 1085 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 EIF3CQ99613 913 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 PKD2L1Q9P0L9 805 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 FHOD1Q9Y613 1164 aa16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-202ENST00000409472 MACROD2A1Z1Q3 448 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 NFKBIEO00221 500 aa16.75■□□□□ 0.27
SCAMP4-202ENST00000409472 SRGAP2O75044 1071 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms