RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MSL3Q8N5Y2 521 aaKnown RBP18.59■□□□□ 0.57
NUP50-203ENST00000407019 CNKSR1Q969H4 720 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 LSM14BQ9BX40 385 aaKnown RBP18.59■□□□□ 0.57
NUP50-203ENST00000407019 JADE2Q9NQC1 790 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 JRKLQ9Y4A0 524 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 CAPN6Q9Y6Q1 641 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 FAM86B1E9PN63 330 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 FAM86B2P0C5J1 330 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 MCM3P25205 808 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 GPS2Q13227 327 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 CC2D2BQ6DHV5 1058 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 SYT2Q8N9I0 419 aaPredicted RBP18.59■□□□□ 0.57
NUP50-203ENST00000407019 SYN2Q92777 582 aaPredicted RBP18.59■□□□□ 0.57
NUP50-203ENST00000407019 ALS2CR12Q96Q35 445 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 MLXIPQ9HAP2 919 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 SYNPO2Q9UMS6 1093 aa18.59■□□□□ 0.57
NUP50-203ENST00000407019 MEIS1O00470 390 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.57
NUP50-203ENST00000407019 MOCS3O95396 460 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 SPATA31C1P0DKV0 1188 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 CHRNA5P30532 468 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 MAGEA1P43355 309 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 PABPC4Q13310 644 aaKnown RBP eCLIP18.58■□□□□ 0.57
NUP50-203ENST00000407019 GIT2Q14161 759 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 ASTE1Q2TB18 679 aaPredicted RBP18.58■□□□□ 0.57
NUP50-203ENST00000407019 TDRD12Q587J7 1177 aaKnown RBP18.58■□□□□ 0.57
NUP50-203ENST00000407019 IQCEQ6IPM2 695 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 GPIHBP1Q8IV16 184 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 NLRC4Q9NPP4 1024 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 SNX12Q9UMY4 172 aa18.58■□□□□ 0.57
NUP50-203ENST00000407019 OPLAHO14841 1288 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 CETN3O15182 167 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 PJA2O43164 708 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 NOL4O94818 638 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
NUP50-203ENST00000407019 PSMC6P62333 389 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 ADAM9Q13443 819 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 RRP1BQ14684 758 aaKnown RBP18.58■□□□□ 0.56
NUP50-203ENST00000407019 SLC9C1Q4G0N8 1177 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 FAM83BQ5T0W9 1011 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 SFMBT2Q5VUG0 894 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 HGSNATQ68CP4 663 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
NUP50-203ENST00000407019 PRR12Q9ULL5 1215 aa18.58■□□□□ 0.56
NUP50-203ENST00000407019 A0A1W2PRG0 241 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 TARSL2A2RTX5 802 aaKnown RBP18.57■□□□□ 0.56
NUP50-203ENST00000407019 H3BQF6 201 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 ZNF185O15231 689 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 MSH4O15457 936 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 HOXA13P31271 388 aaPredicted RBP18.57■□□□□ 0.56
NUP50-203ENST00000407019 GFPT1Q06210 699 aaPredicted RBP18.57■□□□□ 0.56
NUP50-203ENST00000407019 PRMT6Q96LA8 375 aaPredicted RBP18.57■□□□□ 0.56
NUP50-203ENST00000407019 REEP2Q9BRK0 252 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 SUGCTQ9HAC7 445 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 VAV3Q9UKW4 847 aa18.57■□□□□ 0.56
NUP50-203ENST00000407019 PIK3CDO00329 1044 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 SERPING1P05155 500 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 CYP3A4P08684 503 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 CYP2C19P33261 490 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 ZNF76P36508 570 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 EPS15P42566 896 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 POLR2FP61218 127 aaKnown RBP18.56■□□□□ 0.56
NUP50-203ENST00000407019 CASP8Q14790 479 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 SFR1Q86XK3 245 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 SUPT20HQ8NEM7 779 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 ZCCHC17Q9NP64 241 aaKnown RBP18.56■□□□□ 0.56
NUP50-203ENST00000407019 HERC5Q9UII4 1024 aaKnown RBP18.56■□□□□ 0.56
NUP50-203ENST00000407019 RBAK-RBAKDNI3L0D1 243 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 PDE2AO00408 941 aaPredicted RBP18.56■□□□□ 0.56
NUP50-203ENST00000407019 PRLRP16471 622 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 NR2F2P24468 414 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 CASP5P51878 434 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 SPICE1Q8N0Z3 855 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 C7orf43Q8WVR3 580 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUP50-203ENST00000407019 PDE11AQ9HCR9 933 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 TMOD2Q9NZR1 351 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 TRAF3IP3Q9Y228 551 aa18.56■□□□□ 0.56
NUP50-203ENST00000407019 STAT2P52630 851 aa18.55■□□□□ 0.56
NUP50-203ENST00000407019 TRAF1Q13077 416 aa18.55■□□□□ 0.56
NUP50-203ENST00000407019 KNOP1Q1ED39 458 aaKnown RBP18.55■□□□□ 0.56
NUP50-203ENST00000407019 MAP9Q49MG5 647 aa18.55■□□□□ 0.56
NUP50-203ENST00000407019 EPM2AIP1Q7L775 607 aaPredicted RBP18.55■□□□□ 0.56
NUP50-203ENST00000407019 DRC1Q96MC2 740 aa18.55■□□□□ 0.56
NUP50-203ENST00000407019 CRACR2AQ9BSW2 395 aa18.55■□□□□ 0.56
NUP50-203ENST00000407019 POLR3CQ9BUI4 534 aaPredicted RBP18.55■□□□□ 0.56
NUP50-203ENST00000407019 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
NUP50-203ENST00000407019 YDJCA8MPS7 323 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 PPIP5K2O43314 1243 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 TLR2O60603 784 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 PKNOX2Q96KN3 472 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.54■□□□□ 0.56
NUP50-203ENST00000407019 HYOU1Q9Y4L1 999 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 TCP1P17987 556 aaKnown RBP18.54■□□□□ 0.56
NUP50-203ENST00000407019 RASSF7Q02833 373 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 CYP4A11Q02928 519 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 C2orf54Q08AI8 447 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 CREG2Q8IUH2 290 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms