RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 RXRGP48443 463 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 CCT5P48643 541 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 VEGFBP49765 207 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 AK2P54819 239 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 CTSWP56202 376 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 TAF11Q15544 211 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 TBC1D10BQ4KMP7 808 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 VHLLQ6RSH7 139 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 PNMA8AQ86V59 439 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 CHCHD4Q8N4Q1 142 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 CPA6Q8N4T0 437 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 TTLL11Q8NHH1 800 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 IPO4Q8TEX9 1081 aaKnown RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 FUBP3Q96I24 572 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 TBATAQ96M53 351 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 TTC1Q99614 292 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 CDC6Q99741 560 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 MRPL4Q9BYD3 311 aaKnown RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 OSBPL5Q9H0X9 879 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 KMT5AQ9NQR1 393 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 ARHGEF4Q9NR80 690 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 FNDC3AQ9Y2H6 1198 aaKnown RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 KCNMB2Q9Y691 235 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 SCN9AQ15858 1988 aa6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 ZNF646O15015 1829 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P7-201ENST00000400214 POLR2AP24928 1970 aaKnown RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 COL4A5P29400 1685 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 TRBV23-1A0A0A0MS06 115 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 IQCA1LA6NCM1 817 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 TTC36A6NLP5 189 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 H3BM21 787 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 TGFBR3LH3BV60 316 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 FZD9O00144 591 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 GRM8O00222 908 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 PAGE1O75459 146 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 MTA2O94776 668 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 NPTXRO95502 500 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 MT-CO1P00395 513 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 CCND1P24385 295 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 CYP2C19P33261 490 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 GSK3AP49840 483 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 IDH3AP50213 366 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 RPS8P62241 208 aaKnown RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 PEAR1Q5VY43 1037 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 FAM180BQ6P0A1 224 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 OLFM4Q6UX06 510 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 VASH1Q7L8A9 365 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 UBE3BQ7Z3V4 1068 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 CMTR1Q8N1G2 835 aaKnown RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 CELF1Q92879 486 aaKnown RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 USP7Q93009 1102 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 KLRG1Q96E93 195 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 IFT22Q9H7X7 185 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 SMC4Q9NTJ3 1288 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 TNPO3Q9Y5L0 923 aaKnown RBP6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 KIF16BQ96L93 1317 aa6.24□□□□□ -1.41
HMGB3P7-201ENST00000400214 hCG_1642624A0A1W2PR95 340 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 GLTPD2A6NH11 291 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 PHF20L1A8MW92 1017 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 J3QL48 77 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 GOLIM4O00461 696 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 LILRA1O75019 489 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 CILPO75339 1184 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 PYGMP11217 842 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 NCAM1P13591 858 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 ZKSCAN1P17029 563 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 BPIP17213 487 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 ADD2P35612 726 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 TXLNAP40222 546 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 IREB2P48200 963 aaKnown RBP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 RPS26P62854 115 aaKnown RBP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 FOXO4P98177 505 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 KCNMA1Q12791 1236 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 GTF2H3Q13889 308 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 ZNF460Q14592 562 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 SLC9A5Q14940 896 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 PCBP2Q15366 365 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 CCDC84Q86UT8 332 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 FCHSD1Q86WN1 690 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 SLC41A1Q8IVJ1 513 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 GIMAP8Q8ND71 665 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 CRB3Q9BUF7 120 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 CEP44Q9C0F1 390 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 EHMT1Q9H9B1 1298 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 EFCC1Q9HA90 598 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 SEC31BQ9NQW1 1179 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 PCDHB14Q9Y5E9 798 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 HRH3Q9Y5N1 445 aa6.23□□□□□ -1.41
HMGB3P7-201ENST00000400214 ADAMTSL1Q8N6G6 1762 aa6.22□□□□□ -1.41
HMGB3P7-201ENST00000400214 IPO8O15397 1037 aaKnown RBP6.22□□□□□ -1.41
HMGB3P7-201ENST00000400214 GUCY2CP25092 1073 aa6.22□□□□□ -1.41
HMGB3P7-201ENST00000400214 CCT4P50991 539 aaKnown RBP6.22□□□□□ -1.41
HMGB3P7-201ENST00000400214 USP14P54578 494 aa6.22□□□□□ -1.41
HMGB3P7-201ENST00000400214 NRLP54845 237 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms