RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TOGARAM2Q6ZUX3 1019 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 SLC7A3Q8WY07 619 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 KIFAP3Q92845 792 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 TTC26A0AVF1 554 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 PPP1R3GB7ZBB8 358 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 ENC1O14682 589 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCAF4-202ENST00000399804 PADI6Q6TGC4 694 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 PPM1KQ8N3J5 372 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 NSUN6Q8TEA1 469 aaKnown RBP15.39■□□□□ 0.05
SCAF4-202ENST00000399804 NRBP2Q9NSY0 501 aa15.39■□□□□ 0.05
SCAF4-202ENST00000399804 A0A1B0GTH6 734 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 CD44P16070 742 aaKnown RBP15.38■□□□□ 0.05
SCAF4-202ENST00000399804 RPS12P25398 132 aaKnown RBP15.38■□□□□ 0.05
SCAF4-202ENST00000399804 PEX3P56589 373 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 TRIM58Q8NG06 486 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 CNKSR2Q8WXI2 1034 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 SH2D3AQ9BRG2 576 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 LXNQ9BS40 222 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 KMT5AQ9NQR1 393 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 C5P01031 1676 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 ARFGEF2Q9Y6D5 1785 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 RASSF7Q02833 373 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 PTPROQ16827 1216 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 PDXDC2PQ6P474 469 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 GIMAP8Q8ND71 665 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-202ENST00000399804 IFT81Q8WYA0 676 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 ACCSQ96QU6 501 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 TBC1D22BQ9NU19 505 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 ABHD10Q9NUJ1 306 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 CTTNBP2NLQ9P2B4 639 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 TAL1P17542 331 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-202ENST00000399804 CTNNA2P26232 953 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 EIF4A3P38919 411 aaKnown RBP15.38■□□□□ 0.05
SCAF4-202ENST00000399804 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 TRPC3Q13507 836 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 ZNF280CQ8ND82 737 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 VTI1AQ96AJ9 217 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 TMX2Q9Y320 296 aa15.38■□□□□ 0.05
SCAF4-202ENST00000399804 A0A087X0B3 334 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 ERICH4A6NGS2 130 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 HOXA7P31268 230 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 BAATQ14032 418 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 POTEAQ6S8J7 498 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 NHEJ1Q9H9Q4 299 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 AHDC1Q5TGY3 1603 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 WNT10BO00744 389 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 P4HBP07237 508 aaKnown RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 CCZ1BP86790 482 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 CCZ1P86791 482 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 IFFO1Q0D2I5 559 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 COG2Q14746 738 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 NAA30Q147X3 362 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 ZNF710Q8N1W2 664 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 SLC10A4Q96EP9 437 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 WDR64B1ANS9 1081 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 QARSP47897 775 aaKnown RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 NR1I3Q14994 352 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 KNOP1Q1ED39 458 aaKnown RBP15.37■□□□□ 0.05
SCAF4-202ENST00000399804 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
SCAF4-202ENST00000399804 GSTTP1A0A1W2PQM5 241 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 TBX3O15119 743 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 SPOPO43791 374 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 CEP104O60308 925 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 TUBBP07437 444 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 NCAPHQ15003 741 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 MIS18BP1Q6P0N0 1132 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 ZKSCAN4Q969J2 545 aaPredicted RBP15.36■□□□□ 0.05
SCAF4-202ENST00000399804 MRIQ9BWK5 157 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 TMEM206Q9H813 350 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 LIMA1Q9UHB6 759 aaKnown RBP15.36■□□□□ 0.05
SCAF4-202ENST00000399804 CTNND1O60716 968 aaKnown RBP15.36■□□□□ 0.05
SCAF4-202ENST00000399804 FDX1P10109 184 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 INPP5BP32019 993 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 MTF1Q14872 753 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 RPS6KA1Q15418 735 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 NAALADL2Q58DX5 795 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 PSAPP07602 524 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 H2AFZP0C0S5 128 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 IGBP1P78318 339 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 EPHA7Q15375 998 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 H2AFVQ71UI9 128 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 CDAN1Q8IWY9 1227 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 DNAI2Q9GZS0 605 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 BCCIPQ9P287 314 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCAF4-202ENST00000399804 EYA4O95677 639 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 NR3C1P04150 777 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 OSBPP22059 807 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 VAV2P52735 878 aa15.36■□□□□ 0.05
SCAF4-202ENST00000399804 FKBP1AP62942 108 aaKnown RBP15.36■□□□□ 0.05
SCAF4-202ENST00000399804 MYL7Q01449 175 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms