RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 GDAQ9Y2T3 454 aa18.59■□□□□ 0.57
SIN3A-203ENST00000394949 FRMPD2Q68DX3 1309 aaPredicted RBP18.58■□□□□ 0.57
SIN3A-203ENST00000394949 BCORL1Q5H9F3 1711 aa18.58■□□□□ 0.57
SIN3A-203ENST00000394949 SGK1O00141 431 aa18.58■□□□□ 0.57
SIN3A-203ENST00000394949 CA4P22748 312 aa18.58■□□□□ 0.57
SIN3A-203ENST00000394949 SCNN1DP51172 638 aa18.58■□□□□ 0.57
SIN3A-203ENST00000394949 ARHGEF16Q5VV41 709 aa18.58■□□□□ 0.57
SIN3A-203ENST00000394949 MLXIPQ9HAP2 919 aa18.58■□□□□ 0.57
SIN3A-203ENST00000394949 BBOX1O75936 387 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 MAGOHP61326 146 aaKnown RBP18.58■□□□□ 0.56
SIN3A-203ENST00000394949 BSPRYQ5W0U4 402 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 GDAP1Q8TB36 358 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 CHMP6Q96FZ7 201 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 LRGUKQ96M69 825 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 SPC25Q9HBM1 224 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 TRPC5Q9UL62 973 aaPredicted RBP18.58■□□□□ 0.56
SIN3A-203ENST00000394949 USP6P35125 1406 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 ARMC2Q8NEN0 867 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 PCDHA1Q9Y5I3 950 aa18.58■□□□□ 0.56
SIN3A-203ENST00000394949 CAV1Q03135 178 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 DOK7Q18PE1 504 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 BEND6Q5SZJ8 279 aaPredicted RBP18.57■□□□□ 0.56
SIN3A-203ENST00000394949 UNC13DQ70J99 1090 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 CCDC127Q96BQ5 260 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 MXD3Q9BW11 206 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 AMNQ9BXJ7 453 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 BATF3Q9NR55 127 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 HAUS2Q9NVX0 235 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 BCS1LQ9Y276 419 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 PPP1R37O75864 691 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 TTC4O95801 387 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 KRT3P12035 628 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 CUL4BQ13620 913 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 MGEA5O60502 916 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 RWDD2BP57060 319 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 ZNF449Q6P9G9 518 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 IFT122Q9HBG6 1241 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 ERVV-1B6SEH8 477 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 CDC25AP30304 524 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 DMP1Q13316 513 aaPredicted RBP18.57■□□□□ 0.56
SIN3A-203ENST00000394949 SDCCAG3Q96C92 435 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 TMEM206Q9H813 350 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 ST7Q9NRC1 585 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 NLRP1Q9C000 1473 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.568e-8■■■□□ 18.8
SIN3A-203ENST00000394949 ERBB3P21860 1342 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 NCOA3Q9Y6Q9 1424 aa18.57■□□□□ 0.56
SIN3A-203ENST00000394949 PDE1BQ01064 536 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 ABCB5Q2M3G0 1257 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 XKR9Q5GH70 373 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 CSRNP1Q96S65 589 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 EDEM3Q9BZQ6 932 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 SLITRK6Q9H5Y7 841 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 TBK1Q9UHD2 729 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 MAD1L1Q9Y6D9 718 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 SNX1Q13596 522 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 DIXDC1Q155Q3 683 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 MMEL1Q495T6 779 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 ATG16L1Q676U5 607 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 NME8Q8N427 588 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 NSMCE1Q8WV22 266 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 PACSIN2Q9UNF0 486 aaPredicted RBP18.56■□□□□ 0.56
SIN3A-203ENST00000394949 CREB3O43889 395 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 ADCY1Q08828 1119 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 ARHGAP18Q8N392 663 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 SYT2Q8N9I0 419 aaPredicted RBP18.56■□□□□ 0.56
SIN3A-203ENST00000394949 SPECC1L-ADORA2AF8WAN1 911 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 H7C0C1 242 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 ATP5OP48047 213 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 ACTN3Q08043 901 aaPredicted RBP18.56■□□□□ 0.56
SIN3A-203ENST00000394949 DPY19L2Q6NUT2 758 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 TRIM50Q86XT4 487 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 GSPT2Q8IYD1 628 aaKnown RBP18.56■□□□□ 0.56
SIN3A-203ENST00000394949 HNRNPLLQ8WVV9 542 aaKnown RBP18.56■□□□□ 0.56
SIN3A-203ENST00000394949 SERPINI1Q99574 410 aa18.56■□□□□ 0.56
SIN3A-203ENST00000394949 EIF3HO15372 352 aaKnown RBP eCLIP18.55■□□□□ 0.56
SIN3A-203ENST00000394949 GPC4O75487 556 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 DLATP10515 647 aaKnown RBP18.55■□□□□ 0.56
SIN3A-203ENST00000394949 EPN3Q9H201 632 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 PVALEFA0A1B0GWK0 134 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 TTC26A0AVF1 554 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 TEX33O43247 280 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.55■□□□□ 0.56
SIN3A-203ENST00000394949 ACCSQ96QU6 501 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 TRIM55Q9BYV6 548 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 TCP10L2B9ZVM9 353 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 TNNC2P02585 160 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 CYP4A11Q02928 519 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 CENPUQ71F23 418 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 NPHP4O75161 1426 aaPredicted RBP18.55■□□□□ 0.56
SIN3A-203ENST00000394949 IQANK1A0A1B0GTG1 560 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 FAM187AA6NFU0 413 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 DDIT3P35638 169 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 CAPRIN2Q6IMN6 1127 aaKnown RBP18.55■□□□□ 0.56
SIN3A-203ENST00000394949 SPATA4Q8NEY3 305 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 GRAMD1AQ96CP6 724 aa18.55■□□□□ 0.56
SIN3A-203ENST00000394949 FAM170AA1A519 330 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms