RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PLTPP55058 493 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 GRB10Q13322 594 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 RASAL2Q9UJF2 1139 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 COL5A2P05997 1499 aaPredicted RBP17.64■□□□□ 0.41
PCDH1-203ENST00000394536 A0A087X0T9 212 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 SYF2O95926 243 aaKnown RBP17.64■□□□□ 0.41
PCDH1-203ENST00000394536 FAM228BP0C875 321 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 PSMD2Q13200 908 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 PPP1R7Q15435 360 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 PACSIN1Q9BY11 444 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 TBC1D22AQ8WUA7 517 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 SPZ1Q9BXG8 430 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 AMACRQ9UHK6 382 aa17.64■□□□□ 0.41
PCDH1-203ENST00000394536 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 MRC1P22897 1456 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 PNMA6FA0A0J9YX94 578 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 SLC9A1P19634 815 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 SLCO1A2P46721 670 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 SFR1Q86XK3 245 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 ADGRF4Q8IZF3 695 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 PLCD4Q9BRC7 762 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 RNF14Q9UBS8 474 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
PCDH1-203ENST00000394536 VPS41P49754 854 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 GRIK5Q16478 980 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 RNF10Q8N5U6 811 aaKnown RBP17.63■□□□□ 0.41
PCDH1-203ENST00000394536 ANKS4BQ8N8V4 417 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
PCDH1-203ENST00000394536 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 GLI1P08151 1106 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 GRAPQ13588 217 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 CCDC174Q6PII3 467 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 CREG2Q8IUH2 290 aa17.63■□□□□ 0.41
PCDH1-203ENST00000394536 GRAPLQ8TC17 118 aaPredicted RBP17.63■□□□□ 0.41
PCDH1-203ENST00000394536 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 GDF11O95390 407 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 FGGP02679 453 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 CENPPQ6IPU0 288 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 MTRF1LQ9UGC7 380 aaKnown RBP17.62■□□□□ 0.41
PCDH1-203ENST00000394536 EIF3HO15372 352 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDH1-203ENST00000394536 ZNF211Q13398 564 aaPredicted RBP17.62■□□□□ 0.41
PCDH1-203ENST00000394536 SYCE1Q8N0S2 351 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 MMGT1Q8N4V1 131 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 THRAP3Q9Y2W1 955 aaKnown RBP17.62■□□□□ 0.41
PCDH1-203ENST00000394536 KIF4AO95239 1232 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 ATP2B4P23634 1241 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 CORO7P57737 925 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 CACNA2D3Q8IZS8 1091 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 MRRFQ96E11 262 aaKnown RBP17.62■□□□□ 0.41
PCDH1-203ENST00000394536 JPH2Q9BR39 696 aaPredicted RBP17.62■□□□□ 0.41
PCDH1-203ENST00000394536 BAIAP2L1Q9UHR4 511 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 PTPN22Q9Y2R2 807 aa17.62■□□□□ 0.41
PCDH1-203ENST00000394536 DAPK3O43293 454 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 SP4Q02446 784 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 FAM178BQ8IXR5 827 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 EFCC1Q9HA90 598 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 ATRNO75882 1429 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 SLIT3O75094 1523 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 GBP2P32456 591 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 NF2P35240 595 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 CALCOCO2Q13137 446 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 SEPT7Q16181 437 aaKnown RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 WHAMMQ8TF30 809 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 NAP1L4Q99733 375 aaKnown RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 SAMD15Q9P1V8 674 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 RAD51CO43502 376 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 CTTNQ14247 550 aaKnown RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 TNIP1Q15025 636 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 SLC18A3Q16572 532 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 MEA1Q16626 185 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 GRIPAP1Q4V328 841 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 GPATCH4Q5T3I0 446 aaKnown RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 KCNK18Q7Z418 384 aa17.61■□□□□ 0.41
PCDH1-203ENST00000394536 TSEN2Q8NCE0 465 aaKnown RBP17.61■□□□□ 0.41
PCDH1-203ENST00000394536 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 SART1O43290 800 aaKnown RBP17.6■□□□□ 0.41
PCDH1-203ENST00000394536 PDHBP11177 359 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 MESDQ14696 234 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 DENND2CQ68D51 928 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 CCDC91Q7Z6B0 441 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 FAM186BQ8IYM0 893 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 C4orf32Q8N8J7 132 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 ZNF384Q8TF68 577 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 ANO3Q9BYT9 981 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.6■□□□□ 0.41
PCDH1-203ENST00000394536 BCL9O00512 1426 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 ARHGEF35A5YM69 484 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 RGS16O15492 202 aaPredicted RBP17.6■□□□□ 0.41
PCDH1-203ENST00000394536 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 FAM153BP0C7A2 387 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 ADCY1Q08828 1119 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 FAM153CQ494X1 144 aa17.6■□□□□ 0.41
PCDH1-203ENST00000394536 GLE1Q53GS7 698 aaKnown RBP17.6■□□□□ 0.41
PCDH1-203ENST00000394536 FBXO11Q86XK2 927 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms