RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 TRIM39Q9HCM9 518 aa4.89□□□□□ -1.63
MDM2-208ENST00000393410 SRPK3Q9UPE1 567 aa4.89□□□□□ -1.63
MDM2-208ENST00000393410 CCDC163A0A0D9SF12 145 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 CCDC66A2RUB6 948 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 FAM90A27PA6NNH2 459 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 DDX3XO00571 662 aaKnown RBP eCLIP4.88□□□□□ -1.63
MDM2-208ENST00000393410 KCNK3O14649 394 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 KCNQ2O43526 872 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 ZNF28P17035 718 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 DNM2P50570 870 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 MLLT6P55198 1093 aaPredicted RBP4.88□□□□□ -1.63
MDM2-208ENST00000393410 CTSWP56202 376 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 JAM2P57087 298 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 GPR19Q15760 415 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 ABHD17CQ6PCB6 329 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 PTRH1Q86Y79 214 aaKnown RBP4.88□□□□□ -1.63
MDM2-208ENST00000393410 ZC3H7AQ8IWR0 971 aaKnown RBP4.88□□□□□ -1.63
MDM2-208ENST00000393410 DTX3Q8N9I9 347 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 MRFAP1L1Q96HT8 127 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 CLUHP3Q96NS8 147 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 MRPL4Q9BYD3 311 aaKnown RBP4.88□□□□□ -1.63
MDM2-208ENST00000393410 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 NCOA5Q9HCD5 579 aaKnown RBP4.88□□□□□ -1.63
MDM2-208ENST00000393410 SMURF1Q9HCE7 757 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 CATSPERZQ9NTU4 200 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 RTEL1Q9NZ71 1219 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 SFMBT1Q9UHJ3 866 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 COQ6Q9Y2Z9 468 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 DUSP10Q9Y6W6 482 aa4.88□□□□□ -1.63
MDM2-208ENST00000393410 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.87□□□□□ -1.63
MDM2-208ENST00000393410 TCRBV16S1A1N1A0A5B0 115 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 ZNF561-AS1K7EIQ3 104 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 PRICKLE3O43900 615 aaPredicted RBP4.87□□□□□ -1.63
MDM2-208ENST00000393410 EFCAB14O75071 495 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 RAPGEF3O95398 923 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 NAT1P18440 290 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 KRT15P19012 456 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 CD276Q5ZPR3 534 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 MCTP2Q6DN12 878 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 FRMD5Q7Z6J6 570 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 TXNDC5Q8NBS9 432 aaKnown RBP4.87□□□□□ -1.63
MDM2-208ENST00000393410 SH3TC2Q8TF17 1288 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 ZCCHC14Q8WYQ9 949 aaKnown RBP4.87□□□□□ -1.63
MDM2-208ENST00000393410 MAGEB10Q96LZ2 347 aaPredicted RBP4.87□□□□□ -1.63
MDM2-208ENST00000393410 CLIC6Q96NY7 704 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 TMEM209Q96SK2 561 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 CROTQ9UKG9 612 aa4.87□□□□□ -1.63
MDM2-208ENST00000393410 PLD2O14939 933 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 PPP1R12AO14974 1030 aaPredicted RBP4.86□□□□□ -1.63
MDM2-208ENST00000393410 COL6A1P12109 1028 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 PTPN1P18031 435 aaKnown RBP4.86□□□□□ -1.63
MDM2-208ENST00000393410 IL13P35225 146 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 ST5P78524 1137 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 LACTBP83111 547 aaPredicted RBP4.86□□□□□ -1.63
MDM2-208ENST00000393410 PFKPQ01813 784 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 SEC23AQ15436 765 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 CRY1Q16526 586 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 VASNQ6EMK4 673 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 FSTL4Q6MZW2 842 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 CISD2Q8N5K1 135 aaKnown RBP4.86□□□□□ -1.63
MDM2-208ENST00000393410 DDX1Q92499 740 aaKnown RBP4.86□□□□□ -1.63
MDM2-208ENST00000393410 RNPC3Q96LT9 517 aaKnown RBP4.86□□□□□ -1.63
MDM2-208ENST00000393410 NUB1Q9Y5A7 615 aa4.86□□□□□ -1.63
MDM2-208ENST00000393410 ZNF839A8K0R7 811 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 IL18BPO95998 194 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 GLRBP48167 497 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 GJA9P57773 515 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 NFIXQ14938 502 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 SKIDA1Q1XH10 827 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 TM4SF20Q53R12 229 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 FAM47CQ5HY64 1035 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 FIGNQ5HY92 759 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 FAM26FQ5R3K3 315 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 PRAMEF18Q5VWM3 479 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 OVCH1Q7RTY7 1134 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 FERMT3Q86UX7 667 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 NLGN4XQ8N0W4 816 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 RELTQ969Z4 430 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 YTHDC1Q96MU7 727 aaKnown RBP4.85□□□□□ -1.63
MDM2-208ENST00000393410 TEPSINQ96N21 525 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 CELF4Q9BZC1 486 aaKnown RBP4.85□□□□□ -1.63
MDM2-208ENST00000393410 SLC39A2Q9NP94 309 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 DLL4Q9NR61 685 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 USP40Q9NVE5 1235 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 RIC8BQ9NVN3 520 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 TMEM260Q9NX78 707 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 ATP23Q9Y6H3 246 aa4.85□□□□□ -1.63
MDM2-208ENST00000393410 ESYT3A0FGR9 886 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 FOXD2O60548 495 aaPredicted RBP4.84□□□□□ -1.63
MDM2-208ENST00000393410 C4BPAP04003 597 aaKnown RBP4.84□□□□□ -1.63
MDM2-208ENST00000393410 DBPQ10586 325 aaPredicted RBP4.84□□□□□ -1.63
MDM2-208ENST00000393410 ZFYVE27Q5T4F4 411 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 CPZQ66K79 652 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 HHIPL2Q6UWX4 724 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 IGSF22Q8N9C0 903 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 MBD6Q96DN6 1003 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 ZFP69BQ9UJL9 534 aa4.84□□□□□ -1.63
MDM2-208ENST00000393410 MROH6A6NGR9 719 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms