RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SKIDA1Q1XH10 827 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 KCTD1Q719H9 257 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 LIMS2Q7Z4I7 341 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 MTDHQ86UE4 582 aaKnown RBP5.31□□□□□ -1.56
TRAV40-201ENST00000390467 NUDT10Q8NFP7 164 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 NUDT11Q96G61 164 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 CDC6Q99741 560 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 ALG1Q9BT22 464 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 PDGFDQ9GZP0 370 aaPredicted RBP5.31□□□□□ -1.56
TRAV40-201ENST00000390467 TMEM168Q9H0V1 697 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 DLL4Q9NR61 685 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 SIRPGQ9P1W8 387 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 PPP1R1BQ9UD71 204 aaPredicted RBP5.31□□□□□ -1.56
TRAV40-201ENST00000390467 ZFP69BQ9UJL9 534 aa5.31□□□□□ -1.56
TRAV40-201ENST00000390467 KLHL18O94889 574 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 KNG1P01042 644 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 CKMP06732 381 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 MAGEA10P43363 369 aaPredicted RBP5.3□□□□□ -1.56
TRAV40-201ENST00000390467 GLRBP48167 497 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 ADAM17P78536 824 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 ZNF827Q17R98 1081 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 MAMDC2Q7Z304 686 aaPredicted RBP5.3□□□□□ -1.56
TRAV40-201ENST00000390467 FAM124AQ86V42 546 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 SCUBE1Q8IWY4 988 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 PCDH19Q8TAB3 1148 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 IGDCC4Q8TDY8 1250 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 PTPRN2Q92932 1015 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 KCND1Q9NSA2 647 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 SMPD4Q9NXE4 827 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 SNTG2Q9NY99 539 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 PPP4R1LQ9P1A2 415 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 CBLCQ9ULV8 474 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 PCDHA8Q9Y5H6 950 aa5.3□□□□□ -1.56
TRAV40-201ENST00000390467 KDM2BQ8NHM5 1336 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.29□□□□□ -1.56
TRAV40-201ENST00000390467 FAM90A27PA6NNH2 459 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 ZNF839A8K0R7 811 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 ARVCFO00192 962 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 WNT9AO14904 365 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 LAMTOR5O43504 91 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 AMY2AP04746 511 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 AMY2BP19961 511 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 PFKPQ01813 784 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 PAK1Q13153 545 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 DPH6Q7L8W6 267 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 KBTBD2Q8IY47 623 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 STPG3Q8N7X2 389 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 LOXL4Q96JB6 756 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 DEPDC7Q96QD5 511 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 FTSJ1Q9UET6 329 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 SRPK3Q9UPE1 567 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 MRPS23Q9Y3D9 190 aaKnown RBP5.29□□□□□ -1.56
TRAV40-201ENST00000390467 PCDHA9Q9Y5H5 950 aa5.29□□□□□ -1.56
TRAV40-201ENST00000390467 ZNF536O15090 1300 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 MAN2B1O00754 1011 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 AQP7O14520 342 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 CYP7B1O75881 506 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 IL18BPO95998 194 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 PYGMP11217 842 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 GUCY1A3Q02108 690 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 NFATC3Q12968 1075 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 SMAD2Q15796 467 aaKnown RBP5.28□□□□□ -1.56
TRAV40-201ENST00000390467 PTRH1Q86Y79 214 aaKnown RBP5.28□□□□□ -1.56
TRAV40-201ENST00000390467 KLHL36Q8N4N3 616 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 KISS1RQ969F8 398 aaPredicted RBP5.28□□□□□ -1.56
TRAV40-201ENST00000390467 C8orf49Q96NF6 230 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 PTPN18Q99952 460 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 SLC39A2Q9NP94 309 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 ARHGAP20Q9P2F6 1191 aa5.28□□□□□ -1.56
TRAV40-201ENST00000390467 KCNK3O14649 394 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 CRTAMO95727 393 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 SRGAP2CP0DJJ0 459 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 PDE6AP16499 860 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 EPHB4P54760 987 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 RBL2Q08999 1139 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 GPR19Q15760 415 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 FSTL4Q6MZW2 842 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 DBX2Q6ZNG2 339 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 ARHGAP36Q6ZRI8 547 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 GPR155Q7Z3F1 870 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 FBXW5Q969U6 566 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 ARMC5Q96C12 935 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 SAMD11Q96NU1 681 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 TACO1Q9BSH4 297 aaKnown RBP5.27□□□□□ -1.57
TRAV40-201ENST00000390467 DHRS4Q9BTZ2 278 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 HIRIP3Q9BW71 556 aaPredicted RBP5.27□□□□□ -1.57
TRAV40-201ENST00000390467 MEGF9Q9H1U4 602 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 SLC52A2Q9HAB3 445 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 SMURF1Q9HCE7 757 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 CATSPERZQ9NTU4 200 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 ST6GALNAC2Q9UJ37 374 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 ADAM29Q9UKF5 820 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 NUB1Q9Y5A7 615 aa5.27□□□□□ -1.57
TRAV40-201ENST00000390467 ZNF561-AS1K7EIQ3 104 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 GPR42O15529 346 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 FBXO21O94952 628 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 INSRRP14616 1297 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 ZNF20P17024 532 aa5.26□□□□□ -1.57
TRAV40-201ENST00000390467 PTPN1P18031 435 aaKnown RBP5.26□□□□□ -1.57
TRAV40-201ENST00000390467 KRT15P19012 456 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms