RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 NAP1L4Q99733 375 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 DCP1AQ9NPI6 582 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 AGPAT5Q9NUQ2 364 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 KLHL11Q9NVR0 708 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ABCA8O94911 1581 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 MROH7-TTC4A0A0A0MT08 1334 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 I3L4J1 428 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 GNA14O95837 355 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 CCNE1P24864 410 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ATP5DP30049 168 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ACTN3Q08043 901 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 TUBB2AQ13885 445 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 MUM1Q2TAK8 710 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SAAL1Q96ER3 474 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 TUBB2BQ9BVA1 445 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 KLHL14Q9P2G3 628 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 BMP3P12645 472 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ARHGAP25P42331 645 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 FAM83BQ5T0W9 1011 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 PRAMEF18Q5VWM3 479 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 RFX6Q8HWS3 928 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 CFAP61Q8NHU2 1237 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ELAC2Q9BQ52 826 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 KMT5AQ9NQR1 393 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 RGL1Q9NZL6 768 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 MKRN1Q9UHC7 482 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 CDK12Q9NYV4 1490 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 AP5Z1O43299 807 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 CTDNEP1O95476 244 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 TFRCP02786 760 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 ACTN1P12814 892 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SLC12A1Q13621 1099 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SH2D4BQ5SQS7 431 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 TBC1D1Q86TI0 1168 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 DHTKD1Q96HY7 919 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 ALG13Q9NP73 1137 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 AKT3Q9Y243 479 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 PLAAQ9Y263 795 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 GOLGA8KD6RF30 607 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 TAL1P17542 331 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 PSMC2P35998 433 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 LIFRP42702 1097 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 CC2D1AQ6P1N0 951 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 CCNYQ8ND76 341 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 KCNV2Q8TDN2 545 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 CNKSR1Q969H4 720 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 PDLIM2Q96JY6 352 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ZNF341Q9BYN7 854 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 GPR108Q9NPR9 543 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ABCF3Q9NUQ8 709 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 MRPL11Q9Y3B7 192 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 ABCB11O95342 1321 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 TRIM66O15016 1216 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 N4BP1O75113 896 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 MMP10P09238 476 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 FXR1P51114 621 aaKnown RBP eCLIP5.41□□□□□ -1.54
LTN1-202ENST00000389194 STAT2P52630 851 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SLC8A3P57103 927 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 VSNL1P62760 191 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 ZBED6P86452 979 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 BRINP3Q76B58 766 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 THNSL1Q8IYQ7 743 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 GSDMBQ8TAX9 411 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 HSPH1Q92598 858 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 CFAP36Q96G28 342 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 CYTH2Q99418 400 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 TSKSQ9UJT2 592 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 KITP10721 976 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 ZNF18P17022 549 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 KLRK1P26718 216 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 COPB2P35606 906 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 MTMR3Q13615 1198 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 TSTA3Q13630 321 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 HIBCHQ6NVY1 386 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 RNF10Q8N5U6 811 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 ELMO3Q96BJ8 720 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SUDS3Q9H7L9 328 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.41□□□□□ -1.54
LTN1-202ENST00000389194 ABCC12Q96J65 1359 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 A0A1B0GUA9 196 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 LRRD1A4D1F6 860 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 PPP1R12AO14974 1030 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 OPHN1O60890 802 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 GCKP35557 465 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 SNX16P57768 344 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 CCT6BQ92526 530 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 RAVER2Q9HCJ3 691 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 ANAPC4Q9UJX5 808 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 CCDC151A5D8V7 595 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 PGRMC1O00264 195 aaKnown RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 NR1D1P20393 614 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 PTK2Q05397 1052 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 BBS9Q3SYG4 887 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 ANKRD40Q6AI12 368 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 OR2W6PQ8NHA6 318 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 NT5C1BQ96P26 610 aa5.41□□□□□ -1.54
LTN1-202ENST00000389194 FEZ2Q9UHY8 353 aaPredicted RBP5.41□□□□□ -1.54
LTN1-202ENST00000389194 CPDO75976 1380 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms