RNA–Protein interactions for RNA: ENST00000383829.6

BRPF1-201, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-201ENST00000383829 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
BRPF1-201ENST00000383829 TTC19Q6DKK2 380 aaPredicted RBP18.71■□□□□ 0.59
BRPF1-201ENST00000383829 STAG2Q8N3U4 1231 aa18.71■□□□□ 0.59
BRPF1-201ENST00000383829 BAIAP2L1Q9UHR4 511 aa18.71■□□□□ 0.59
BRPF1-201ENST00000383829 LMNB2Q03252 620 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 DPYDQ12882 1025 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 NAA25Q14CX7 972 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 CCDC62Q6P9F0 684 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 FUCA2Q9BTY2 467 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 ST7Q9NRC1 585 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 NRBP2Q9NSY0 501 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 ADD3Q9UEY8 706 aaKnown RBP18.71■□□□□ 0.58
BRPF1-201ENST00000383829 CAPN11Q9UMQ6 739 aa18.71■□□□□ 0.58
BRPF1-201ENST00000383829 MROH1Q8NDA8 1641 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 RASSF2P50749 326 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 DHX9Q08211 1270 aaKnown RBP18.7■□□□□ 0.58
BRPF1-201ENST00000383829 MTF1Q14872 753 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 CCDC13Q8IYE1 715 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 MCUR1Q96AQ8 359 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 EDEM3Q9BZQ6 932 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 ZNF148Q9UQR1 794 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 ATP8A1Q9Y2Q0 1164 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 SRGAP2O75044 1071 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 ZNF131P52739 623 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 PLTPP55058 493 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 CUL1Q13616 776 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 BRDTQ58F21 947 aaPredicted RBP18.7■□□□□ 0.58
BRPF1-201ENST00000383829 ARHGAP24Q8N264 748 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 ANKRD35Q8N283 1001 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 PCIF1Q9H4Z3 704 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 UBE2TQ9NPD8 197 aaPredicted RBP18.7■□□□□ 0.58
BRPF1-201ENST00000383829 KMT5AQ9NQR1 393 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 INTS9Q9NV88 658 aaKnown RBP18.7■□□□□ 0.58
BRPF1-201ENST00000383829 SERPINA10Q9UK55 444 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 PCDHA6Q9UN73 950 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 PCDHA8Q9Y5H6 950 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 HOXA13P31271 388 aaPredicted RBP18.7■□□□□ 0.58
BRPF1-201ENST00000383829 NEDD9Q14511 834 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 ANKRD20A3Q5VUR7 823 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 QTRT2Q9H974 415 aaKnown RBP18.7■□□□□ 0.58
BRPF1-201ENST00000383829 SENP2Q9HC62 589 aa18.7■□□□□ 0.58
BRPF1-201ENST00000383829 NR1I3Q14994 352 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 PALM2Q8IXS6 379 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 ARHGEF1Q92888 912 aaKnown RBP18.69■□□□□ 0.58
BRPF1-201ENST00000383829 TMEM260Q9NX78 707 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 ITIH6Q6UXX5 1313 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 I3L4J1 428 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 DAPK3O43293 454 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 MAPK4P31152 587 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 PIK3CAP42336 1068 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 TRIM9Q9C026 710 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 MIS12Q9H081 205 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 SLIT1O75093 1534 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L15C9J2P7 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L13C9JLJ4 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L11C9JVI0 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L18D6R9N7 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L22D6RA61 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L17D6RBQ6 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L19D6RCP7 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L20D6RJB6 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 E9PMD0 336 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 TROVE2P10155 538 aaKnown RBP eCLIP18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L24Q0WX57 530 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 CCDC110Q8TBZ0 833 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 ABCD1P33897 745 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 IRX5P78411 483 aaPredicted RBP18.69■□□□□ 0.58
BRPF1-201ENST00000383829 BFSP1Q12934 665 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 CTTNQ14247 550 aaKnown RBP18.69■□□□□ 0.58
BRPF1-201ENST00000383829 PPP1R2P3Q6NXS1 205 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 USP49Q70CQ1 688 aa18.69■□□□□ 0.58
BRPF1-201ENST00000383829 STAM2O75886 525 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 ARHGAP4P98171 946 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 KCNH2Q12809 1159 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 PAXIP1Q6ZW49 1069 aaPredicted RBP18.68■□□□□ 0.58
BRPF1-201ENST00000383829 SFR1Q86XK3 245 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 RHOT2Q8IXI1 618 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 EFCAB13Q8IY85 973 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 ADSSL1Q8N142 457 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 CDHR1Q96JP9 859 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 MYOM1P52179 1685 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 PALMO75781 387 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 CSADQ9Y600 493 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 USP17L10C9JJH3 530 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 GH2P01242 217 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 SLC7A3Q8WY07 619 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 ANKRD7Q92527 254 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 CEP170P1Q96L14 293 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 NFU1Q9UMS0 254 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 CRKP46108 304 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 PODNQ7Z5L7 613 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 PTPN22Q9Y2R2 807 aa18.68■□□□□ 0.58
BRPF1-201ENST00000383829 ECEL1O95672 775 aa18.67■□□□□ 0.58
BRPF1-201ENST00000383829 NR3C1P04150 777 aa18.67■□□□□ 0.58
BRPF1-201ENST00000383829 NR1D1P20393 614 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms