RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 METTL13Q8N6R0 699 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 ACCSQ96QU6 501 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 FERMT1Q9BQL6 677 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 EPC1Q9H2F5 836 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 DPH5Q9H2P9 285 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 NFAT5O94916 1531 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 SALL1Q9NSC2 1324 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 HOXA7P31268 230 aaPredicted RBP19.41■□□□□ 0.7
UBL3-201ENST00000380680 USP11P51784 963 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 KRT71Q3SY84 523 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 RUFY4Q6ZNE9 571 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 SMIM22K7EJ46 135 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 NDUFB10O96000 172 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 CHP1Q99653 195 aa19.41■□□□□ 0.7
UBL3-201ENST00000380680 LIMA1Q9UHB6 759 aaKnown RBP19.41■□□□□ 0.7
UBL3-201ENST00000380680 C2orf54Q08AI8 447 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 ALKBH5Q6P6C2 394 aaKnown RBP19.4■□□□□ 0.7
UBL3-201ENST00000380680 HHIPL2Q6UWX4 724 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 TC2NQ8N9U0 490 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 SRGAP2O75044 1071 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 KCNH2Q12809 1159 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 KMT5AQ9NQR1 393 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 KNDC1Q76NI1 1749 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 LMNB1P20700 586 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 PKN1Q16512 942 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 C10orf67Q8IYJ2 551 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 PDS5AQ29RF7 1337 aaKnown RBP19.4■□□□□ 0.7
UBL3-201ENST00000380680 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
UBL3-201ENST00000380680 RHOBTB3O94955 611 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 PDE6CP51160 858 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 EN1Q05925 392 aaPredicted RBP19.39■□□□□ 0.69
UBL3-201ENST00000380680 MESDQ14696 234 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 NT5C1BQ96P26 610 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 RAB17Q9H0T7 212 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.39■□□□□ 0.69
UBL3-201ENST00000380680 PIM2Q9P1W9 311 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 TRPC6Q9Y210 931 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 VTI1AQ96AJ9 217 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 DYDC2Q96IM9 177 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 NSRP1Q9H0G5 558 aaKnown RBP19.39■□□□□ 0.69
UBL3-201ENST00000380680 TMEM206Q9H813 350 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 JMJD4Q9H9V9 463 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 MRPS25P82663 173 aaKnown RBP19.39■□□□□ 0.69
UBL3-201ENST00000380680 MICALL1Q8N3F8 863 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 SLC7A3Q8WY07 619 aa19.39■□□□□ 0.69
UBL3-201ENST00000380680 RAVER2Q9HCJ3 691 aaKnown RBP19.39■□□□□ 0.69
UBL3-201ENST00000380680 HERC5Q9UII4 1024 aaKnown RBP19.39■□□□□ 0.69
UBL3-201ENST00000380680 A0A1W2PQC6 194 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 PALM3A6NDB9 673 aaPredicted RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 H0YCG3 227 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 NR3C1P04150 777 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 PNMA6AP0CW24 399 aaPredicted RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 CEP63Q96MT8 703 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 AKAP12Q02952 1782 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 MXI1P50539 228 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 LLGL1Q15334 1064 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 EAPPQ56P03 285 aaPredicted RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 CEP85LQ5SZL2 805 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 BANK1Q8NDB2 785 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 RMDN3Q96TC7 470 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 IQCGQ9H095 443 aaKnown RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 UBE2TQ9NPD8 197 aaPredicted RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 RGL1Q9NZL6 768 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 MYMKA6NI61 221 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 ATP8B1O43520 1251 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 CTNNA1P35221 906 aaKnown RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 SEMA3FQ13275 785 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 SEPT14Q6ZU15 432 aa19.38■□□□□ 0.69
UBL3-201ENST00000380680 ZBTB12Q9Y330 459 aaPredicted RBP19.38■□□□□ 0.69
UBL3-201ENST00000380680 GOLGA8IPA6NC78 632 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 GOLGA8JA6NMD2 632 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 PEX3P56589 373 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 EPB41L5Q9HCM4 733 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 HEXIM1O94992 359 aaKnown RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 KCNJ6P48051 423 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 VPS41P49754 854 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 SPP2Q13103 211 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 KNOP1Q1ED39 458 aaKnown RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 EARS2Q5JPH6 523 aaKnown RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 ZBTB8OSQ8IWT0 167 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 DCPSQ96C86 337 aaKnown RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.37■□□□□ 0.69
UBL3-201ENST00000380680 NFIAQ12857 509 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 EEPD1Q7L9B9 569 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 MRRFQ96E11 262 aaKnown RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 MAK16Q9BXY0 300 aaKnown RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 NBPF3Q9H094 633 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 ABCB6Q9NP58 842 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 PPP1R3GB7ZBB8 358 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 PRELPP51888 382 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 CCDC121Q6ZUS5 278 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
UBL3-201ENST00000380680 MED4Q9NPJ6 270 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 NRBP2Q9NSY0 501 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 NYAP2Q9P242 653 aa19.37■□□□□ 0.69
UBL3-201ENST00000380680 FMN2Q9NZ56 1722 aa19.36■□□□□ 0.69
UBL3-201ENST00000380680 ZBTB7AO95365 584 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms