RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 PPP1R14AQ96A00 147 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 USP26Q9BXU7 913 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 CAPS2Q9BXY5 557 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 INTS9Q9NV88 658 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 IFNA8P32881 189 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 PWP1Q13610 501 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 KRT14P02533 472 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 NNMTP40261 264 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 ESRRGP62508 458 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 STXBP2Q15833 593 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 FTCDO95954 541 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 MT-ND3P03897 115 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 VCAM1P19320 739 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 CCDC84Q86UT8 332 aaPredicted RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 TSKSQ9UJT2 592 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 UBXN8O00124 270 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 SLC7A5Q01650 507 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 CYP27A1Q02318 531 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 ENOX1Q8TC92 643 aaKnown RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 BCAS4Q8TDM0 211 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 FAF2Q96CS3 445 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 ARPP21Q9UBL0 812 aaPredicted RBP13.39□□□□□ -0.27
CHD3-203ENST00000380358 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 IL16Q14005 1332 aa13.39□□□□□ -0.27
CHD3-203ENST00000380358 APOA4P06727 396 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 CCT5P48643 541 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 GCKRQ14397 625 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 FAM133AQ8N9E0 248 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 CEP70Q8NHQ1 597 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 TBC1D22AQ8WUA7 517 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 LARSQ9P2J5 1176 aaKnown RBP13.38□□□□□ -0.27
CHD3-203ENST00000380358 HYOU1Q9Y4L1 999 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 ZNF263O14978 683 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 NDUFAF2Q8N183 169 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
CHD3-203ENST00000380358 AP1M1Q9BXS5 423 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 MIS12Q9H081 205 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 MROH5Q6ZUA9 1318 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 ORC4O43929 436 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 RLBP1P12271 317 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 EPB42P16452 691 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 CDC25AP30304 524 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 RFX3P48380 749 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
CHD3-203ENST00000380358 IL9RQ01113 521 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 ERFEQ4G0M1 354 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 TRIML1Q8N9V2 468 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 EFCAB8A8MWE9 144 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 HMBSP08397 361 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 HSPA6P17066 643 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 RRM2BQ7LG56 351 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 NAF1Q96HR8 494 aaKnown RBP13.38□□□□□ -0.27
CHD3-203ENST00000380358 OSBPL10Q9BXB5 764 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 L3MBTL1Q9Y468 752 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 hCG_2014768A0A024R1R8 64 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 MAP2K2P36507 400 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
CHD3-203ENST00000380358 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 NR2F2P24468 414 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 PTGDRQ13258 359 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 C19orf44Q9H6X5 657 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 CCDC78A2IDD5 438 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 PFKFB1P16118 471 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 HDAC1Q13547 482 aaPredicted RBP13.37□□□□□ -0.27
CHD3-203ENST00000380358 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
CHD3-203ENST00000380358 RNF207Q6ZRF8 634 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 BHMTQ93088 406 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 CNOT6LQ96LI5 555 aaKnown RBP13.37□□□□□ -0.27
CHD3-203ENST00000380358 TRAF3IP3Q9Y228 551 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 CACNB3P54284 484 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 CROCCP2Q86T23 111 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 ZBTB18Q99592 522 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
CHD3-203ENST00000380358 HSPA4LO95757 839 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 PPP3CCP48454 512 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 SRGAP2O75044 1071 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 SERPINI2O75830 405 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 ZBED1O96006 694 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 CERS3Q8IU89 383 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
CHD3-203ENST00000380358 PJA2O43164 708 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 KIAA1755Q5JYT7 1200 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
CHD3-203ENST00000380358 TDRD7Q8NHU6 1098 aaKnown RBP13.37□□□□□ -0.27
CHD3-203ENST00000380358 KLHL29Q96CT2 875 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms