RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 NFU1Q9UMS0 254 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 NCAPD2Q15021 1401 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 NAA35Q5VZE5 725 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 TMC4Q7Z404 712 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 LRRC37BQ96QE4 947 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 SAMSN1Q9NSI8 373 aaKnown RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 PSD3Q9NYI0 1048 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 DONSONQ9NYP3 566 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 ADGRL3Q9HAR2 1447 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 CA4P22748 312 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 SF3A3Q12874 501 aaKnown RBP eCLIP10.32□□□□□ -0.765e-6■■■■■ 39.5
SNX1-202ENST00000380285 DNAJC24Q6P3W2 148 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 ANKRD13CQ8N6S4 541 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 TRIML2Q8N7C3 387 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PYROXD1Q8WU10 500 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 GJA10Q969M2 543 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 NDUFB9Q9Y6M9 179 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 TTLL1O95922 423 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 DLATP10515 647 aaKnown RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 POLGP54098 1239 aaPredicted RBP10.32□□□□□ -0.76
SNX1-202ENST00000380285 OCA2Q04671 838 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PPP2R5CQ13362 524 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PARP9Q8IXQ6 854 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 FAM133AQ8N9E0 248 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 NUB1Q9Y5A7 615 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 PCDHA1Q9Y5I3 950 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 MRFAP1Q9Y605 127 aa10.32□□□□□ -0.76
SNX1-202ENST00000380285 OATP04181 439 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 POLA2Q14181 598 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 KMT5BQ4FZB7 885 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 MFSD14BQ5SR56 506 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 PPCSQ9HAB8 311 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 ANGPTL3Q9Y5C1 460 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 A0A1W2PQC6 194 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 ARHGEF37A1IGU5 675 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 IRX1P78414 480 aaPredicted RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 SNX1Q13596 522 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 WDR17Q8IZU2 1322 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TOM1O60784 492 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 KRT38O76015 456 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 A1BGP04217 495 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 KRT1P04264 644 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 MCF2P10911 925 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TEX9Q8N6V9 391 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 JAG2Q9Y219 1238 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 PFASO15067 1338 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 ZMYND10O75800 440 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 MRPL46Q9H2W6 279 aaKnown RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 ADCY10Q96PN6 1610 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 MAP3K15Q6ZN16 1313 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TET3O43151 1660 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 CERKLQ49MI3 558 aaPredicted RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 ALKBH5Q6P6C2 394 aaKnown RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 ZC3H18Q86VM9 953 aaKnown RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
SNX1-202ENST00000380285 ATP6V1G3Q96LB4 118 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 RASSF10A6NK89 507 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 HNRNPDLO14979 420 aaKnown RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 CHEK2O96017 543 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 PLS3P13797 630 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 POLD1P28340 1107 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 CHRNA3P32297 505 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 GGCXP38435 758 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 ARL4CP56559 192 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TMED1Q13445 227 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 CYP4F22Q6NT55 531 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 NSMFQ6X4W1 530 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 UNC13DQ70J99 1090 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 GLG1Q92896 1179 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNX1-202ENST00000380285 EDC3Q96F86 508 aaKnown RBP10.31□□□□□ -0.76
SNX1-202ENST00000380285 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 DIXDC1Q155Q3 683 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 MED10Q9BTT4 135 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 NOD1Q9Y239 953 aa10.31□□□□□ -0.76
SNX1-202ENST00000380285 ARL4AP40617 200 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 SERPINB4P48594 390 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 ANO5Q75V66 913 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 IL17REQ8NFR9 667 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 UHMK1Q8TAS1 419 aaKnown RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 LEMD3Q9Y2U8 911 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 CDR2Q01850 454 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 DHX34Q14147 1143 aaKnown RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 GRAMD4Q6IC98 578 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 EPM2AIP1Q7L775 607 aaPredicted RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 TMEM232C9JQI7 657 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 TLR3O15455 904 aaKnown RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 FTCDO95954 541 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 DCAF15Q66K64 600 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 COG1Q8WTW3 980 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 SEPT10Q9P0V9 454 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 APOBEC2Q9Y235 224 aaKnown RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 CTIFO43310 598 aaKnown RBP10.3□□□□□ -0.76
SNX1-202ENST00000380285 MAN1A2O60476 641 aa10.3□□□□□ -0.76
SNX1-202ENST00000380285 USP14P54578 494 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms