RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SMAP1Q8IYB5 467 aaPredicted RBP27.47■■□□□ 1.99
ECHDC3-201ENST00000379215 SLC15A5A6NIM6 579 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 BIN1O00499 593 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 KCNA2P16389 499 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 ZNF165P49910 485 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 ZNF792Q3KQV3 632 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 CNNM4Q6P4Q7 775 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 C17orf99Q6UX52 265 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 FGD4Q96M96 766 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 TRIM9Q9C026 710 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 DNAJC25Q9H1X3 360 aa27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 BMP2KQ9NSY1 1161 aaPredicted RBP27.46■■□□□ 1.99
ECHDC3-201ENST00000379215 DDX39AO00148 427 aaKnown RBP27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 CUL4BQ13620 913 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 MORC3Q14149 939 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 KCNB1Q14721 858 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 ECM1Q16610 540 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 UVSSAQ2YD98 709 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 DEFB115Q30KQ5 88 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 CT47A1Q5JQC4 288 aaPredicted RBP27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 MLKLQ8NB16 471 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 LRRC15Q8TF66 581 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 STAMQ92783 540 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 BPIFA3Q9BQP9 254 aa27.45■■□□□ 1.99
ECHDC3-201ENST00000379215 POTEFA5A3E0 1075 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 ATP9AO75110 1047 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 RPN1P04843 607 aaKnown RBP27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 P4HBP07237 508 aaKnown RBP27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 CYP4F22Q6NT55 531 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 POTEGQ6S5H5 508 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 RNF214Q8ND24 703 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 BLZF1Q9H2G9 400 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 JPH1Q9HDC5 661 aaPredicted RBP27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 SAMM50Q9Y512 469 aa27.45■■□□□ 1.98
ECHDC3-201ENST00000379215 PLXNB2O15031 1838 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 ZNF236Q9UL36 1845 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 CA12O43570 354 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 PLA2G4BP0C869 781 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 CYP4A11Q02928 519 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 MCM6Q14566 821 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 DPCR1Q3MIW9 517 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 DYDC2Q96IM9 177 aa27.44■■□□□ 1.98
ECHDC3-201ENST00000379215 SLITRK3O94933 977 aa27.43■■□□□ 1.98
ECHDC3-201ENST00000379215 NEDD9Q14511 834 aa27.43■■□□□ 1.98
ECHDC3-201ENST00000379215 SEPT14Q6ZU15 432 aa27.43■■□□□ 1.98
ECHDC3-201ENST00000379215 DPP9Q86TI2 863 aa27.43■■□□□ 1.98
ECHDC3-201ENST00000379215 NACC1Q96RE7 527 aa27.43■■□□□ 1.98
ECHDC3-201ENST00000379215 ZSWIM4Q9H7M6 989 aa27.43■■□□□ 1.98
ECHDC3-201ENST00000379215 DKC1O60832 514 aaKnown RBP eCLIP27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 GRM1Q13255 1194 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 KCNK18Q7Z418 384 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 TPH2Q8IWU9 490 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 MSL3Q8N5Y2 521 aaKnown RBP27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 LXNQ9BS40 222 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 RGL1Q9NZL6 768 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 SLC9A2Q9UBY0 812 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 LRRC37A2A6NM11 1700 aa27.42■■□□□ 1.98
ECHDC3-201ENST00000379215 EYA4O95677 639 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 ASIC1P78348 528 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 CRHR2Q13324 411 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 C11orf57Q6ZUT1 292 aaPredicted RBP27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 CAPNS2Q96L46 248 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 PCDHA10Q9Y5I2 948 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 PVALEFA0A1B0GWK0 134 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 E9PMD0 336 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 LYPLA2O95372 231 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 QARSP47897 775 aaKnown RBP27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 CTTNQ14247 550 aaKnown RBP27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 SYT2Q8N9I0 419 aaPredicted RBP27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 CBX8Q9HC52 389 aa27.41■■□□□ 1.98
ECHDC3-201ENST00000379215 COBLO75128 1261 aa27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 CASP1P29466 404 aa27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 DHX8Q14562 1220 aaKnown RBP27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 MAMDC4Q6UXC1 1216 aa27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 ARMCX2Q7L311 632 aa27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 ANP32BQ92688 251 aaKnown RBP27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 VTA1Q9NP79 307 aa27.4■■□□□ 1.98
ECHDC3-201ENST00000379215 BECN2A8MW95 431 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 RHOBTB3O94955 611 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 CCNE2O96020 404 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 SSBP05455 408 aaKnown RBP eCLIP27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 PSAPP07602 524 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 SLC12A3P55017 1021 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 ZNF658Q5TYW1 1059 aaPredicted RBP27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 UNC13DQ70J99 1090 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 EXOC1Q9NV70 894 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 KCND2Q9NZV8 630 aa27.39■■□□□ 1.98
ECHDC3-201ENST00000379215 MYMKA6NI61 221 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 PSMC5P62195 406 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 ISM2Q6H9L7 571 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 MIS18BP1Q6P0N0 1132 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 SOCS4Q8WXH5 440 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 DDX12PQ92771 950 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 ATP6V0A1Q93050 837 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 SYNGAP1Q96PV0 1343 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 SMTNL1A8MU46 457 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 GOLGA6L19H0YKK7 550 aa27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 XRCC6P12956 609 aaKnown RBP eCLIP27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 UBA1P22314 1058 aaKnown RBP27.38■■□□□ 1.97
ECHDC3-201ENST00000379215 PPP1R2P41236 205 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms