RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 INTS5Q6P9B9 1019 aaKnown RBP18.1■□□□□ 0.49
TRIM39-201ENST00000376656 RUFY4Q6ZNE9 571 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 EIF1ADQ8N9N8 165 aaKnown RBP18.1■□□□□ 0.49
TRIM39-201ENST00000376656 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 C3orf20Q8ND61 904 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 RAD54LQ92698 747 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 SGSM3Q96HU1 749 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 SCLT1Q96NL6 688 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 TMEM47Q9BQJ4 181 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 MKNK2Q9HBH9 465 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 RIC8AQ9NPQ8 531 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 PHF20L1A8MW92 1017 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 OPLAHO14841 1288 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 ZCWPW2Q504Y3 356 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 C12orf60Q5U649 245 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 MYOCDQ8IZQ8 938 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 CACNA2D3Q8IZS8 1091 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 FGFBP2Q9BYJ0 223 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 C6orf50Q9HD87 102 aa18.1■□□□□ 0.49
TRIM39-201ENST00000376656 C5orf60A6NFR6 353 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 TSPY3P0CV98 308 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 TSPY8P0CW00 308 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 MAGOHP61326 146 aaKnown RBP18.09■□□□□ 0.49
TRIM39-201ENST00000376656 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
TRIM39-201ENST00000376656 MAGOHBQ96A72 148 aaKnown RBP18.09■□□□□ 0.49
TRIM39-201ENST00000376656 MTMR9Q96QG7 549 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 TFCP2L1Q9NZI6 479 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 DAPK3O43293 454 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 USP11P51784 963 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 ASIC2Q16515 512 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 CALCRLQ16602 461 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 FBXO33Q7Z6M2 555 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 TATDN2Q93075 761 aa18.09■□□□□ 0.49
TRIM39-201ENST00000376656 BHMG1C9JSJ3 638 aaPredicted RBP18.08■□□□□ 0.49
TRIM39-201ENST00000376656 SLC37A4O43826 429 aa18.08■□□□□ 0.49
TRIM39-201ENST00000376656 KIF1CO43896 1103 aaKnown RBP18.08■□□□□ 0.49
TRIM39-201ENST00000376656 E2F5Q15329 346 aa18.08■□□□□ 0.49
TRIM39-201ENST00000376656 PROM2Q8N271 834 aa18.08■□□□□ 0.49
TRIM39-201ENST00000376656 VAT1LQ9HCJ6 419 aa18.08■□□□□ 0.49
TRIM39-201ENST00000376656 TBC1D7Q9P0N9 293 aa18.08■□□□□ 0.49
TRIM39-201ENST00000376656 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.08■□□□□ 0.49
TRIM39-201ENST00000376656 CES2O00748 559 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 ITGA4P13612 1032 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 AGBL2Q5U5Z8 902 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 ACTRT1Q8TDG2 376 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 AIPL1Q9NZN9 384 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 COASYQ13057 564 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 PBKQ96KB5 322 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 AMACRQ9UHK6 382 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 NOC2LQ9Y3T9 749 aaKnown RBP18.08■□□□□ 0.48
TRIM39-201ENST00000376656 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.48
TRIM39-201ENST00000376656 TDP2O95551 362 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 PAEPP09466 180 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 GNA11P29992 359 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 PTK2Q05397 1052 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 CHADLQ6NUI6 762 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 NELFCDQ8IXH7 590 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 METTL13Q8N6R0 699 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRIM39-201ENST00000376656 ECM1Q16610 540 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 LACTB2Q53H82 288 aaPredicted RBP18.07■□□□□ 0.48
TRIM39-201ENST00000376656 MDM1Q8TC05 714 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 GANQ9H2C0 597 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 VEZTQ9HBM0 779 aa18.07■□□□□ 0.48
TRIM39-201ENST00000376656 BSDC1Q9NW68 430 aaPredicted RBP18.07■□□□□ 0.48
TRIM39-201ENST00000376656 PGRMC1O00264 195 aaKnown RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 ZBTB48P10074 688 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 FXR2P51116 673 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 PSMD2Q13200 908 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 KRT71Q3SY84 523 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 SOGA3Q5TF21 947 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 TMC3Q7Z5M5 1100 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 CPLX4Q7Z7G2 160 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 TRIM59Q8IWR1 403 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 LRRC57Q8N9N7 239 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 CCT6BQ92526 530 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 HVCN1Q96D96 273 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 KRIT1O00522 736 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 DRD4P21917 467 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 GKAP1Q5VSY0 366 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 USP17L2Q6R6M4 530 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 EP400NLQ6ZTU2 488 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 ZNF571Q7Z3V5 609 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 CELF1Q92879 486 aaKnown RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 DNAJC19Q96DA6 116 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 ACTN1P12814 892 aa18.06■□□□□ 0.48
TRIM39-201ENST00000376656 CRKLP46109 303 aaKnown RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 REXO1Q8N1G1 1221 aaKnown RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.06■□□□□ 0.484e-7■■□□□ 14.2
TRIM39-201ENST00000376656 CELF4Q9BZC1 486 aaKnown RBP18.06■□□□□ 0.48
TRIM39-201ENST00000376656 TMCO5BA8MYB1 307 aa18.05■□□□□ 0.48
TRIM39-201ENST00000376656 F8W031 263 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms