RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FAM184BQ9ULE4 1060 aa19.62■□□□□ 0.73
PTPDC1-202ENST00000375360 CXCR5P32302 372 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 PRR12Q9ULL5 1215 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 MXI1P50539 228 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 MESDQ14696 234 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 PHLDB2Q86SQ0 1253 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 IFT20Q8IY31 132 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 FAM49AQ9H0Q0 323 aaPredicted RBP19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 TMEM60Q9H2L4 133 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 THAP9Q9H5L6 903 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 FBXO28Q9NVF7 368 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 ENTPD3O75355 529 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 CCDC144BQ3MJ40 725 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 SCYL2Q6P3W7 929 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 APOBEC3FQ8IUX4 373 aaKnown RBP19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 RAD54LQ92698 747 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 UBE2TQ9NPD8 197 aaPredicted RBP19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 GGA3Q9NZ52 723 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 PRELPP51888 382 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 ZBED6P86452 979 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 LRRC63Q05C16 580 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 STXBP2Q15833 593 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 STYK1Q6J9G0 422 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 TMEM206Q9H813 350 aa19.61■□□□□ 0.73
PTPDC1-202ENST00000375360 DEFB129Q9H1M3 183 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 CNTNAP5Q8WYK1 1306 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 PTK2Q05397 1052 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 SWSAP1Q6NVH7 229 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 MB21D1Q8N884 522 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 NYAP2Q9P242 653 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 HYOU1Q9Y4L1 999 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 SIGLEC1Q9BZZ2 1709 aa19.6■□□□□ 0.73
PTPDC1-202ENST00000375360 P4HA1P13674 534 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 GUCY2FP51841 1108 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 COASYQ13057 564 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 CEP55Q53EZ4 464 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 KRIT1O00522 736 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 THNSL1Q8IYQ7 743 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 RETREG2Q8NC44 543 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 PCDHB4Q9Y5E5 795 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 WDR64B1ANS9 1081 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 SMIM22K7EJ46 135 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 SERPINA10Q9UK55 444 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 SLC16A4O15374 487 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 DDR1Q08345 913 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 IFRD2Q12894 506 aaPredicted RBP19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 PPP1R18Q6NYC8 613 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 CCDC63Q8NA47 563 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 GABBR1Q9UBS5 961 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
PTPDC1-202ENST00000375360 STXBP3O00186 592 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 NSFP46459 744 aaKnown RBP19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 KIF22Q14807 665 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 TAB3Q8N5C8 712 aaPredicted RBP19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 ACER1Q8TDN7 264 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 AP5M1Q9H0R1 490 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 ELP3Q9H9T3 547 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 TFDP1Q14186 410 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 IPO4Q8TEX9 1081 aaKnown RBP19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 KCNB2Q92953 911 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 CCDC97Q96F63 343 aaPredicted RBP19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 CCDC94Q9BW85 323 aaPredicted RBP19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 MYOZ2Q9NPC6 264 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 TSKSQ9UJT2 592 aa19.58■□□□□ 0.73
PTPDC1-202ENST00000375360 NDUFA10O95299 355 aa19.58■□□□□ 0.72
PTPDC1-202ENST00000375360 BAATQ14032 418 aaPredicted RBP19.58■□□□□ 0.72
PTPDC1-202ENST00000375360 PPP1R21Q6ZMI0 780 aa19.58■□□□□ 0.72
PTPDC1-202ENST00000375360 LXNQ9BS40 222 aa19.58■□□□□ 0.72
PTPDC1-202ENST00000375360 FAM204AQ9H8W3 233 aa19.58■□□□□ 0.72
PTPDC1-202ENST00000375360 TTLL3Q9Y4R7 772 aa19.58■□□□□ 0.72
PTPDC1-202ENST00000375360 E7EVH7 732 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 ATF7P17544 494 aaPredicted RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 CD58P19256 250 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 USP11P51784 963 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 NLRP7Q8WX94 980 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 EIF2AK1Q9BQI3 630 aaKnown RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 NHEJ1Q9H9Q4 299 aaPredicted RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 TXNDC16Q9P2K2 825 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 CAMTA1Q9Y6Y1 1673 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 ZMYND10O75800 440 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 MFAP3P55082 362 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 SF3A3Q12874 501 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 PPP2R5DQ14738 602 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 PLCD4Q9BRC7 762 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 ECE1P42892 770 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 QARSP47897 775 aaKnown RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 DPH5Q9H2P9 285 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 LRRC4BQ9NT99 713 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 TCP1P17987 556 aaKnown RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 HACE1Q8IYU2 909 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 C2orf69Q8N8R5 385 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 DPF2Q92785 391 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 RTFDC1Q9BY42 306 aaPredicted RBP19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 VCPKMTQ9H867 229 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 TBC1D22BQ9NU19 505 aa19.57■□□□□ 0.72
PTPDC1-202ENST00000375360 PVALEFA0A1B0GWK0 134 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 FTCDO95954 541 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms