RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 RSRC1Q96IZ7 334 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 FAM207AQ9NSI2 230 aaPredicted RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 CPSF2Q9P2I0 782 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 PDS5AQ29RF7 1337 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 NPHP3-ACAD11A0A0J9YXS1 232 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 RMND1Q9NWS8 449 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 LRWD1Q9UFC0 647 aa19.01■□□□□ 0.63
LDLRAP1-201ENST00000374338 MYMKA6NI61 221 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 PSMA7O14818 248 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
LDLRAP1-201ENST00000374338 EPHB6O15197 1021 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 IL1R1P14778 569 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 CALCRLQ16602 461 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 ADGRF4Q8IZF3 695 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 SAAL1Q96ER3 474 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 CNOT6LQ96LI5 555 aaKnown RBP19■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZHX3Q9H4I2 956 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 SH3GLB2Q9NR46 395 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 MAGEC2Q9UBF1 373 aaPredicted RBP19■□□□□ 0.63
LDLRAP1-201ENST00000374338 HSF2BPO75031 334 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 ATP2C2O75185 946 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 SNUPNO95149 360 aaKnown RBP19■□□□□ 0.63
LDLRAP1-201ENST00000374338 TTI2Q6NXR4 508 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 PROM2Q8N271 834 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 ANKS1AQ92625 1134 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 THOC1Q96FV9 657 aaKnown RBP19■□□□□ 0.63
LDLRAP1-201ENST00000374338 OSBPL7Q9BZF2 842 aa19■□□□□ 0.63
LDLRAP1-201ENST00000374338 SBF2Q86WG5 1849 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 OPLAHO14841 1288 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 RBBP5Q15291 538 aaKnown RBP18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 HOOK2Q96ED9 719 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 FGFBP2Q9BYJ0 223 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 HAUS4Q9H6D7 363 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 BATF3Q9NR55 127 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 SCAF8Q9UPN6 1271 aaKnown RBP18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 LUC7L2Q9Y383 392 aaKnown RBP18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 RASSF10A6NK89 507 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 ENO4A6NNW6 628 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 POLRMTO00411 1230 aaKnown RBP18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 FAM107AO95990 144 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 PDE6BP35913 854 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 CRY2Q49AN0 593 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 GIMAP8Q8ND71 665 aaPredicted RBP18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 SEMA6BQ9H3T3 888 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 MLXIPQ9HAP2 919 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 IRAK4Q9NWZ3 460 aa18.99■□□□□ 0.63
LDLRAP1-201ENST00000374338 LAMB1P07942 1786 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 TULP1O00294 542 aaPredicted RBP18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 NCK2O43639 380 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 GDF11O95390 407 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 STAT3P40763 770 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 GRB10Q13322 594 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 SNX1Q13596 522 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 NFRKBQ6P4R8 1299 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 OR8K1Q8NGG5 319 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 CDK5RAP3Q96JB5 506 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZIM3Q96PE6 472 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 JMJD4Q9H9V9 463 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 H7C1D1 291 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 GNA11P29992 359 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 SNX29Q8TEQ0 813 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 NOC4LQ9BVI4 516 aaKnown RBP18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 SPZ1Q9BXG8 430 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 BCAS3Q9H6U6 928 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZBTB12Q9Y330 459 aaPredicted RBP18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 CAPN6Q9Y6Q1 641 aa18.98■□□□□ 0.63
LDLRAP1-201ENST00000374338 FAM153BP0C7A2 387 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 FAM153CQ494X1 144 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 USH1GQ495M9 461 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 KRT25Q7Z3Z0 450 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 NELFCDQ8IXH7 590 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 SPDYE1Q8NFV5 336 aaPredicted RBP18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 PNMA5Q96PV4 448 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 FAM153AQ9UHL3 310 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 LRRC10BA6NIK2 292 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 CAND2O75155 1236 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 GUCY2FP51841 1108 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 TRADDQ15628 312 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 P2RX5Q93086 422 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 ZNF287Q9HBT7 754 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 BLOC1S4Q9NUP1 217 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 DLEC1Q9Y238 1755 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 MGRN1O60291 552 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 RHOBTB3O94955 611 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 PECAM1P16284 738 aaPredicted RBP18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 HSPA1LP34931 641 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 ADCY7P51828 1080 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 TRAF1Q13077 416 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 EMC10Q5UCC4 262 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 CCDC70Q6NSX1 233 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 CDC42EP5Q6NZY7 148 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 SPICE1Q8N0Z3 855 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 CCSER1Q9C0I3 900 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 QTRT2Q9H974 415 aaKnown RBP18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 SERPINB13Q9UIV8 391 aa18.97■□□□□ 0.63
LDLRAP1-201ENST00000374338 DDX60LQ5H9U9 1706 aaKnown RBP18.96■□□□□ 0.63
LDLRAP1-201ENST00000374338 ITIH6Q6UXX5 1313 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms