RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 VSIG10LQ86VR7 867 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 LRRC15Q8TF66 581 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 PORCNQ9H237 461 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 A0A087WWV3 80 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 IPO5O00410 1097 aaKnown RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 MAFGO15525 162 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 GAS7O60861 476 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 STAM2O75886 525 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 BMP6P22004 513 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 RPA1P27694 616 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 CCND2P30279 289 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 CCT6AP40227 531 aaKnown RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 ANKRD35Q8N283 1001 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 MLKLQ8NB16 471 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 LARP4BQ92615 738 aaKnown RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 PLIN2Q99541 437 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 NUDT12Q9BQG2 462 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
USF1-203ENST00000368021 BLOC1S4Q9NUP1 217 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 MORF4L1Q9UBU8 362 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 DACH1Q9UI36 760 aa13.5□□□□□ -0.25
USF1-203ENST00000368021 NR3C2P08235 984 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 ARP10275 920 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 MTMR1Q13613 665 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 CUL4BQ13620 913 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 ARHGEF6Q15052 776 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 B3GNT9Q6UX72 402 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 SV2BQ7L1I2 683 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 RAD54LQ92698 747 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 STAMQ92783 540 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 C7orf25Q9BPX7 421 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 POLR3CQ9BUI4 534 aaPredicted RBP13.49□□□□□ -0.25
USF1-203ENST00000368021 LRRC27Q9C0I9 530 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 RMND1Q9NWS8 449 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 LCTP09848 1927 aa13.49□□□□□ -0.25
USF1-203ENST00000368021 ZSCAN20P17040 1043 aaPredicted RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 MUTP22033 750 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 PRKCZQ05513 592 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 KCNB1Q14721 858 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 NCAPG2Q86XI2 1143 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 SHCBP1Q8NEM2 672 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 GPRASP2Q96D09 838 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 PURBQ96QR8 312 aaKnown RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 TRIM9Q9C026 710 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 MROH8Q9H579 483 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 TBC1D22BQ9NU19 505 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 GABRQQ9UN88 632 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 PTCH2Q9Y6C5 1203 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 DOCK3Q8IZD9 2030 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 BECN2A8MW95 431 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 IKBKBO14920 756 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 MYCP01106 439 aaPredicted RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 MYCLP12524 364 aaPredicted RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 ERCC3P19447 782 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 CASP1P29466 404 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 ECM1Q16610 540 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 CREBRFQ8IUR6 639 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 DHX40Q8IX18 779 aaKnown RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 BLZF1Q9H2G9 400 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 AGO4Q9HCK5 861 aaKnown RBP13.48□□□□□ -0.25
USF1-203ENST00000368021 SRRDQ9UH36 339 aa13.48□□□□□ -0.25
USF1-203ENST00000368021 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 DHX15O43143 795 aaKnown RBP13.47□□□□□ -0.25
USF1-203ENST00000368021 MED24O75448 989 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 HOXD10P28358 340 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 FLT3LGP49771 235 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 CCNA1P78396 465 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
USF1-203ENST00000368021 FBXO46Q6PJ61 603 aaPredicted RBP13.47□□□□□ -0.25
USF1-203ENST00000368021 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 NLRX1Q86UT6 975 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 RAET1EQ8TD07 263 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 CDHR1Q96JP9 859 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 PRIMPOLQ96LW4 560 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 EIF2AK1Q9BQI3 630 aaKnown RBP13.47□□□□□ -0.25
USF1-203ENST00000368021 TUFT1Q9NNX1 390 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
USF1-203ENST00000368021 KIAA1024Q9UPX6 916 aa13.47□□□□□ -0.25
USF1-203ENST00000368021 UQCRHLA0A096LP55 91 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 CCDC66A2RUB6 948 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 SMTNL1A8MU46 457 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 EML1O00423 815 aa13.46□□□□□ -0.25
USF1-203ENST00000368021 CAPN15O75808 1086 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms