RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SRPK3Q9UPE1 567 aa6.18□□□□□ -1.42
RNU6-553P-201ENST00000364047 WASF3Q9UPY6 502 aa6.18□□□□□ -1.42
RNU6-553P-201ENST00000364047 TCRBV5S4A2TA0A5A2 114 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 DDX3XO00571 662 aaKnown RBP eCLIP6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 GSTA4O15217 222 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 CYP7B1O75881 506 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 RASGRP1O95267 797 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 PDE6AP16499 860 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 DNM2P50570 870 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 RTP5Q14D33 572 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 RGL3Q3MIN7 710 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 CCDC144BQ3MJ40 725 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 TRIM61Q5EBN2 209 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 MCTP2Q6DN12 878 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 EP400NLQ6ZTU2 488 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 C16orf59Q7L2K0 433 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 PROSER1Q86XN7 944 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 PTRH1Q86Y79 214 aaKnown RBP6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 NLGN4XQ8N0W4 816 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 MAGEB10Q96LZ2 347 aaPredicted RBP6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 TEPSINQ96N21 525 aa6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 MRPL4Q9BYD3 311 aaKnown RBP6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 PDGFDQ9GZP0 370 aaPredicted RBP6.17□□□□□ -1.42
RNU6-553P-201ENST00000364047 MAN2B1O00754 1011 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 ZNF28P17035 718 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 CRY1Q16526 586 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 FIGNQ5HY92 759 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 FAM26FQ5R3K3 315 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 BRAPQ7Z569 592 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 OSTM1Q86WC4 334 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 DTX3Q8N9I9 347 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 L2HGDHQ9H9P8 463 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 NCOA5Q9HCD5 579 aaKnown RBP6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 DLL4Q9NR61 685 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
RNU6-553P-201ENST00000364047 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 ACOT7O00154 380 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 AMY2AP04746 511 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 CYP1A1P04798 512 aaPredicted RBP6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 CKMP06732 381 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 PTPN1P18031 435 aaKnown RBP6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 AMY2BP19961 511 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 IL13P35225 146 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 MLLT6P55198 1093 aaPredicted RBP6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 JAM2P57087 298 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 SKIDA1Q1XH10 827 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 PHF19Q5T6S3 580 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 BTBD8Q5XKL5 378 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 CD276Q5ZPR3 534 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 CISD2Q8N5K1 135 aaKnown RBP6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 TXNDC5Q8NBS9 432 aaKnown RBP6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 DDX1Q92499 740 aaKnown RBP6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 SCLYQ96I15 445 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 RIC8BQ9NVN3 520 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 COQ6Q9Y2Z9 468 aa6.15□□□□□ -1.42
RNU6-553P-201ENST00000364047 MROH6A6NGR9 719 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 FAM90A27PA6NNH2 459 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 ZNF561-AS1K7EIQ3 104 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 KCNK3O14649 394 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 PRICKLE3O43900 615 aaPredicted RBP6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 FOXD2O60548 495 aaPredicted RBP6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 ENO2P09104 434 aaPredicted RBP6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 CNR2P34972 360 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 PFKPQ01813 784 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 UBXN11Q5T124 520 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 ERICH6BQ5W0A0 696 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 TRMT10BQ6PF06 316 aaKnown RBP6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 FERMT3Q86UX7 667 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 FAM124AQ86V42 546 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 CXorf38Q8TB03 319 aa6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 ZCCHC14Q8WYQ9 949 aaKnown RBP6.14□□□□□ -1.43
RNU6-553P-201ENST00000364047 ADAMTS20P59510 1910 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 ZNF839A8K0R7 811 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 PLD2O14939 933 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 FBXO21O94952 628 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 RAPGEF3O95398 923 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 SYN1P17600 705 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 GJA4P35212 333 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 GLRBP48167 497 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 KIAA2012Q0VF49 1180 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 SQSTM1Q13501 440 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 FGD2Q7Z6J4 655 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 SH3TC2Q8TF17 1288 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 LCORQ96JN0 433 aaPredicted RBP6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 YTHDC1Q96MU7 727 aaKnown RBP6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 CELF4Q9BZC1 486 aaKnown RBP6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 TMEM168Q9H0V1 697 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 PIF1Q9H611 641 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 SMURF1Q9HCE7 757 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 TRIM39Q9HCM9 518 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 ARHGAP20Q9P2F6 1191 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 FTSJ1Q9UET6 329 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 ZFP69BQ9UJL9 534 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 DUSP10Q9Y6W6 482 aa6.13□□□□□ -1.43
RNU6-553P-201ENST00000364047 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.12□□□□□ -1.43
RNU6-553P-201ENST00000364047 TCRBV16S1A1N1A0A5B0 115 aa6.12□□□□□ -1.43
RNU6-553P-201ENST00000364047 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
RNU6-553P-201ENST00000364047 B8ZZF3 427 aa6.12□□□□□ -1.43
RNU6-553P-201ENST00000364047 KCNQ2O43526 872 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms