RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PTGDRQ13258 359 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 C4orf32Q8N8J7 132 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 TSEN34Q9BSV6 310 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 ZSCAN16Q9H4T2 348 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 MOXD2PA6NHM9 499 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 TBX3O15119 743 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 PPFIA4O75335 1185 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 COL6A1P12109 1028 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 CEBPZQ03701 1054 aaKnown RBP20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 UBE2Q1Q7Z7E8 422 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 SEPT1Q8WYJ6 367 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 C11orf49Q9H6J7 331 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 VAV3Q9UKW4 847 aa20.19■□□□□ 0.82
PDLIM7-202ENST00000355841 ELP1O95163 1332 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 BAG4O95429 457 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 BRD1O95696 1058 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 LGALS2P05162 132 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 HOXD8P13378 290 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 DDIT3P35638 169 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 KRT76Q01546 638 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 NECAB2Q7Z6G3 386 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 SLFN12Q8IYM2 578 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 KAT2BQ92831 832 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 TTC12Q9H892 705 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 TCEAL9Q9UHQ7 104 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 SAMM50Q9Y512 469 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 CLIC4Q9Y696 253 aa20.18■□□□□ 0.82
PDLIM7-202ENST00000355841 EML1O00423 815 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 OR52Z1P0C646 297 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 SF3A1Q15459 793 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 ZNF746Q6NUN9 644 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 CHAMP1Q96JM3 812 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 GLT1D1Q96MS3 346 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 PCYT2Q99447 389 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 C16orf70Q9BSU1 422 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 MTG1Q9BT17 334 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 STARD7Q9NQZ5 370 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 POLR3EQ9NVU0 708 aa20.17■□□□□ 0.82
PDLIM7-202ENST00000355841 B3GNT9Q6UX72 402 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 ABHD15Q6UXT9 468 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 TFIP11Q9UBB9 837 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 PCDHA12Q9UN75 941 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 GRIN2DO15399 1336 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 ATG7O95352 703 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 SUPT20HL2P0C7V6 817 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 MARK3P27448 753 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 TECP42680 631 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 SPIRE1Q08AE8 756 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 ORC2Q13416 577 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 NCAPH2Q6IBW4 605 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 SWSAP1Q6NVH7 229 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 GLG1Q92896 1179 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 DISC1Q9NRI5 854 aa20.16■□□□□ 0.82
PDLIM7-202ENST00000355841 WDR64B1ANS9 1081 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 BACH1O14867 736 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 KPNA6O60684 536 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 CAPN2P17655 700 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 PPP2R5CQ13362 524 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 IL17AQ16552 155 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 MIS18BP1Q6P0N0 1132 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 TRMT1LQ7Z2T5 733 aaKnown RBP20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 MIER3Q7Z3K6 550 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 CCDC60Q8IWA6 550 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 SMAP1Q8IYB5 467 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 PCDHA10Q9Y5I2 948 aa20.15■□□□□ 0.82
PDLIM7-202ENST00000355841 POTEMA6NI47 508 aa20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 H3BRB1 525 aa20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 F2P00734 622 aa20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 ATP2C1P98194 919 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 KIAA0753Q2KHM9 967 aa20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 NBPF20Q3BBV1 942 aa20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 TUT1Q9H6E5 874 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-202ENST00000355841 CABYRO75952 493 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 PSAPP07602 524 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 PSEN2P49810 448 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 ITGA7Q13683 1181 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 MFSD10Q14728 455 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 LRRC26Q2I0M4 334 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 SLC39A5Q6ZMH5 540 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 RNPEPQ9H4A4 650 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 AZI2Q9H6S1 392 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 GABBR1Q9UBS5 961 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 IGKV6D-21A0A0A0MT36 114 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 LGR5O75473 907 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 SFNP31947 248 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 STAT5BP51692 787 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 JAK3P52333 1124 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 DNM1Q05193 864 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 UGCGQ16739 394 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 IPO9Q96P70 1041 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 ZNF302Q9NR11 478 aa20.13■□□□□ 0.81
PDLIM7-202ENST00000355841 PTPAQ15257 358 aa20.12■□□□□ 0.81
PDLIM7-202ENST00000355841 FAM47CQ5HY64 1035 aa20.12■□□□□ 0.81
PDLIM7-202ENST00000355841 BANK1Q8NDB2 785 aa20.12■□□□□ 0.81
PDLIM7-202ENST00000355841 SMARCAD1Q9H4L7 1026 aa20.12■□□□□ 0.81
PDLIM7-202ENST00000355841 RGL1Q9NZL6 768 aa20.12■□□□□ 0.81
PDLIM7-202ENST00000355841 ZNF215Q9UL58 517 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms