RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MORC3Q14149 939 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 CFAP100Q494V2 611 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 METTL24Q5JXM2 366 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 KRBA2Q6ZNG9 492 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 DYMQ7RTS9 669 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 CREG2Q8IUH2 290 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 NIM1KQ8IY84 436 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 MDM1Q8TC05 714 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 POMGNT1Q8WZA1 660 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 NSUN4Q96CB9 384 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 GBA2Q9HCG7 927 aaPredicted RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 FRMPD2Q68DX3 1309 aaPredicted RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 TOP3BO95985 862 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 ARSAP15289 507 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 HDLBPQ00341 1268 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 SMAD1Q15797 465 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 C17orf99Q6UX52 265 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 PAGE5Q96GU1 130 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 DBNDD1Q9H9R9 158 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 GGA3Q9NZ52 723 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 ARPP21Q9UBL0 812 aaPredicted RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 MTF2Q9Y483 593 aaPredicted RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 TLN1Q9Y490 2541 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 SCN5AQ14524 2016 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 DNM1LO00429 736 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 MAP2K7O14733 419 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 SORBS3O60504 671 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 MATR3P43243 847 aaKnown RBP eCLIP6.36□□□□□ -1.39
CD47-201ENST00000355354 UBASH3AP57075 661 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 GNG11P61952 73 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 PKN2Q16513 984 aaKnown RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 TTMPQ5BVD1 217 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 DCAF12L1Q5VU92 463 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 NAA35Q5VZE5 725 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 KIF6Q6ZMV9 814 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 VSTM4Q8IW00 320 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 ZNF654Q8IZM8 581 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 SPICE1Q8N0Z3 855 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 FAM163AQ96GL9 167 aaPredicted RBP6.36□□□□□ -1.39
CD47-201ENST00000355354 SLC39A2Q9NP94 309 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 TJP2Q9UDY2 1190 aa6.36□□□□□ -1.39
CD47-201ENST00000355354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.36□□□□□ -1.39
CD47-201ENST00000355354 A8MUI8 341 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 MYO1FO00160 1098 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 EML1O00423 815 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 RHBDL3P58872 404 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ZNF507Q8TCN5 953 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 TLR10Q9BXR5 811 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ZMYND8Q9ULU4 1186 aaPredicted RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 MDC1Q14676 2089 aaKnown RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 POTEFA5A3E0 1075 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 B4DLN1 442 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 HMMRO75330 724 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 CCDC192P0DO97 292 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 BCRP11274 1271 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ECE1P42892 770 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 TDO2P48775 406 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 CHAF1AQ13111 956 aaPredicted RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 RESP18Q5W5W9 173 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 POTEDQ86YR6 584 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 FANCBQ8NB91 859 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ZNF668Q96K58 619 aaPredicted RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 TRIM34Q9BYJ4 488 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 CD209Q9NNX6 404 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 SNRNP200O75643 2136 aaKnown RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 SCN10AQ9Y5Y9 1956 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 MBD3O95983 291 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 GM2AP17900 193 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 C2orf54Q08AI8 447 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 LONRF2Q1L5Z9 754 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 LRRC31Q6UY01 552 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 MAPKAPK5Q8IW41 473 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 MRPS27Q92552 414 aaKnown RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 FUBP1Q96AE4 644 aaKnown RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 BTBD6Q96KE9 485 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 COL4A2P08572 1712 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 CUTAO60888 179 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ARID5AQ03989 594 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ADCY1Q08828 1119 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 MAP9Q49MG5 647 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 TTI2Q6NXR4 508 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 CCDC102AQ96A19 550 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ZDHHC15Q96MV8 337 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 ACSS2Q9NR19 701 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 DNAJC17Q9NVM6 304 aaKnown RBP6.35□□□□□ -1.39
CD47-201ENST00000355354 PTPN22Q9Y2R2 807 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 PIKFYVEQ9Y2I7 2098 aa6.35□□□□□ -1.39
CD47-201ENST00000355354 DDTLA6NHG4 134 aaPredicted RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 MYMKA6NI61 221 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 ATMINO43313 823 aaPredicted RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 MMP1P03956 469 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 AMHP03971 560 aa6.34□□□□□ -1.39
CD47-201ENST00000355354 SLC3A2P08195 630 aaKnown RBP6.34□□□□□ -1.39
CD47-201ENST00000355354 SLC9A1P19634 815 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms