RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KANK3Q6NY19 840 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 POTEBQ6S5H4 581 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 CEP57L1Q8IYX8 460 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 CALML4Q96GE6 196 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 EIF2AK1Q9BQI3 630 aaKnown RBP16.46■□□□□ 0.22
CXCL12-201ENST00000343575 TEKT3Q9BXF9 490 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 RGL1Q9NZL6 768 aa16.46■□□□□ 0.22
CXCL12-201ENST00000343575 PLXNA1Q9UIW2 1896 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 CA12O43570 354 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 CHMP2AO43633 222 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 SLITRK3O94933 977 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 CCNE2O96020 404 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 BMP6P22004 513 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 WRAP73Q9P2S5 460 aaPredicted RBP16.45■□□□□ 0.22
CXCL12-201ENST00000343575 DOCK5Q9H7D0 1870 aa16.45■□□□□ 0.22
CXCL12-201ENST00000343575 KIF20AO95235 890 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 CCDC192P0DO97 292 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 CTGFP29279 349 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 MAPK4P31152 587 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 PSMC6P62333 389 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 HTRA3P83110 453 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 CUL4BQ13620 913 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 PLEKHH3Q7Z736 793 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 RASSF8Q8NHQ8 419 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 POLR3CQ9BUI4 534 aaPredicted RBP16.44■□□□□ 0.22
CXCL12-201ENST00000343575 BLZF1Q9H2G9 400 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 ZFYVE28Q9HCC9 887 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 TBC1D22BQ9NU19 505 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 KIAA1024Q9UPX6 916 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 PCNTO95613 3336 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 E9PMD0 336 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 BIN1O00499 593 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 CYP4A11Q02928 519 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 PDE4DQ08499 809 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 MORN1Q5T089 497 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 POTEGQ6S5H5 508 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 CUEDC2Q9H467 287 aa16.44■□□□□ 0.22
CXCL12-201ENST00000343575 SLC26A4O43511 780 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
CXCL12-201ENST00000343575 MCM6Q14566 821 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 EPHA7Q15375 998 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 SYCP1Q15431 976 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 GNPTABQ3T906 1256 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 ISM2Q6H9L7 571 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 LARP4BQ92615 738 aaKnown RBP16.43■□□□□ 0.22
CXCL12-201ENST00000343575 RAD54LQ92698 747 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 DYDC2Q96IM9 177 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 STK17AQ9UEE5 414 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 IVNS1ABPQ9Y6Y0 642 aa16.43■□□□□ 0.22
CXCL12-201ENST00000343575 GTPBP6O43824 516 aaPredicted RBP16.42■□□□□ 0.22
CXCL12-201ENST00000343575 ARIH2O95376 493 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 CTTNQ14247 550 aaKnown RBP16.42■□□□□ 0.22
CXCL12-201ENST00000343575 HAUS3Q68CZ6 603 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 C11orf57Q6ZUT1 292 aaPredicted RBP16.42■□□□□ 0.22
CXCL12-201ENST00000343575 NPLOC4Q8TAT6 608 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 NFASCO94856 1347 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 KDM3AQ9Y4C1 1321 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 LOC102724159A0A0B4J2E5 919 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 SLC15A5A6NIM6 579 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 ZBTB39O15060 712 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 PWP2Q15269 919 aaKnown RBP16.42■□□□□ 0.22
CXCL12-201ENST00000343575 DPCR1Q3MIW9 517 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 ANO6Q4KMQ2 910 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 ARMCX2Q7L311 632 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 ERMNQ8TAM6 284 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 KIAA1524Q8TCG1 905 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 USP6NLQ92738 828 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 CDHR1Q96JP9 859 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 MAGEF1Q9HAY2 307 aa16.42■□□□□ 0.22
CXCL12-201ENST00000343575 MYMKA6NI61 221 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 KLRC4O43908 158 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 SNAI1O95863 264 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-201ENST00000343575 ZSCAN20P17040 1043 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-201ENST00000343575 CAP1Q01518 475 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 MAMDC4Q6UXC1 1216 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 MIER3Q7Z3K6 550 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 ZNF467Q7Z7K2 595 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-201ENST00000343575 FBXO16Q8IX29 292 aaPredicted RBP16.41■□□□□ 0.22
CXCL12-201ENST00000343575 ZNF710Q8N1W2 664 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 MAML3Q96JK9 1138 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 TRIM9Q9C026 710 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 DNAJC25Q9H1X3 360 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 HOOK1Q9UJC3 728 aaKnown RBP16.41■□□□□ 0.22
CXCL12-201ENST00000343575 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
CXCL12-201ENST00000343575 ASB14A6NK59 587 aa16.4■□□□□ 0.22
CXCL12-201ENST00000343575 UBA1P22314 1058 aaKnown RBP16.4■□□□□ 0.22
CXCL12-201ENST00000343575 MORC3Q14149 939 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms