RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ASIC1P78348 528 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 MORC3Q14149 939 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 HYIQ5T013 277 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 MIER3Q7Z3K6 550 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 TPH2Q8IWU9 490 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 SPATA20Q8TB22 786 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 EFCC1Q9HA90 598 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 BMP2KQ9NSY1 1161 aaPredicted RBP19.39■□□□□ 0.7
CLDN4-201ENST00000340958 BLOC1S4Q9NUP1 217 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 POTEFA5A3E0 1075 aa19.39■□□□□ 0.69
CLDN4-201ENST00000340958 TPM4P67936 248 aa19.39■□□□□ 0.69
CLDN4-201ENST00000340958 POTEGQ6S5H5 508 aa19.39■□□□□ 0.69
CLDN4-201ENST00000340958 MLKLQ8NB16 471 aa19.39■□□□□ 0.69
CLDN4-201ENST00000340958 LRRC15Q8TF66 581 aa19.39■□□□□ 0.69
CLDN4-201ENST00000340958 ZNF296Q8WUU4 475 aaPredicted RBP19.39■□□□□ 0.69
CLDN4-201ENST00000340958 POLR3CQ9BUI4 534 aaPredicted RBP19.39■□□□□ 0.69
CLDN4-201ENST00000340958 IVNS1ABPQ9Y6Y0 642 aa19.39■□□□□ 0.69
CLDN4-201ENST00000340958 E9PMD0 336 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 EIF3JO75822 258 aaKnown RBP19.38■□□□□ 0.69
CLDN4-201ENST00000340958 CTTNQ14247 550 aaKnown RBP19.38■□□□□ 0.69
CLDN4-201ENST00000340958 AOPEPQ8N6M6 819 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 C7orf25Q9BPX7 421 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 PORCNQ9H237 461 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 ZFYVE28Q9HCC9 887 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 TUFT1Q9NNX1 390 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 RGL1Q9NZL6 768 aa19.38■□□□□ 0.69
CLDN4-201ENST00000340958 SMTNL1A8MU46 457 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 KRT18P05783 430 aaKnown RBP19.37■□□□□ 0.69
CLDN4-201ENST00000340958 PLA2G4BP0C869 781 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 ITGB3BPQ13352 177 aaPredicted RBP19.37■□□□□ 0.69
CLDN4-201ENST00000340958 EPHA7Q15375 998 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 KCNK18Q7Z418 384 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 DYDC2Q96IM9 177 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 INPP4AQ96PE3 977 aaPredicted RBP19.37■□□□□ 0.69
CLDN4-201ENST00000340958 TRIM9Q9C026 710 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 SOWAHBA6NEL2 793 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 SEPT14Q6ZU15 432 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 DYMQ7RTS9 669 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 FAM133AQ8N9E0 248 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 BPIFA3Q9BQP9 254 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 RTN4Q9NQC3 1192 aaKnown RBP19.37■□□□□ 0.69
CLDN4-201ENST00000340958 EXOC1Q9NV70 894 aa19.37■□□□□ 0.69
CLDN4-201ENST00000340958 TLR2O60603 784 aa19.36■□□□□ 0.69
CLDN4-201ENST00000340958 ATP9AO75110 1047 aa19.36■□□□□ 0.69
CLDN4-201ENST00000340958 SPATA31C1P0DKV0 1188 aa19.36■□□□□ 0.69
CLDN4-201ENST00000340958 BMP6P22004 513 aa19.36■□□□□ 0.69
CLDN4-201ENST00000340958 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
CLDN4-201ENST00000340958 MORF4L1Q9UBU8 362 aa19.36■□□□□ 0.69
CLDN4-201ENST00000340958 IDEP14735 1019 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 KRT76Q01546 638 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 IQCB1Q15051 598 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 NEK9Q8TD19 979 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 HSD17B14Q9BPX1 270 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 ADGRA2Q96PE1 1338 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 ZSWIM8A7E2V4 1837 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 MYMKA6NI61 221 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 DHX15O43143 795 aaKnown RBP19.35■□□□□ 0.69
CLDN4-201ENST00000340958 FKTNO75072 461 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 SLITRK3O94933 977 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 JAK3P52333 1124 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 FAM110CQ1W6H9 321 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 ZNF658Q5TYW1 1059 aaPredicted RBP19.35■□□□□ 0.69
CLDN4-201ENST00000340958 KLHL10Q6JEL2 608 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.35■□□□□ 0.69
CLDN4-201ENST00000340958 EEPD1Q7L9B9 569 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 DHX40Q8IX18 779 aaKnown RBP19.35■□□□□ 0.69
CLDN4-201ENST00000340958 SMYD4Q8IYR2 804 aaPredicted RBP19.35■□□□□ 0.69
CLDN4-201ENST00000340958 KCTD17Q8N5Z5 321 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 BANK1Q8NDB2 785 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 DDX12PQ92771 950 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 CPA4Q9UI42 421 aa19.35■□□□□ 0.69
CLDN4-201ENST00000340958 WDR64B1ANS9 1081 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 SPATA31C2B4DYI2 1134 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 SFNP31947 248 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 SP4Q02446 784 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 KCNB1Q14721 858 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 NACC1Q96RE7 527 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 LXNQ9BS40 222 aa19.34■□□□□ 0.69
CLDN4-201ENST00000340958 ASTN1O14525 1302 aa19.33■□□□□ 0.69
CLDN4-201ENST00000340958 STRNO43815 780 aa19.33■□□□□ 0.69
CLDN4-201ENST00000340958 RGS20O76081 388 aa19.33■□□□□ 0.69
CLDN4-201ENST00000340958 P4HBP07237 508 aaKnown RBP19.33■□□□□ 0.69
CLDN4-201ENST00000340958 PSMC6P62333 389 aa19.33■□□□□ 0.69
CLDN4-201ENST00000340958 STIM1Q13586 685 aa19.33■□□□□ 0.69
CLDN4-201ENST00000340958 CNNM4Q6P4Q7 775 aa19.33■□□□□ 0.69
CLDN4-201ENST00000340958 JPH1Q9HDC5 661 aaPredicted RBP19.33■□□□□ 0.69
CLDN4-201ENST00000340958 SORBS3O60504 671 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 ECM2O94769 699 aaPredicted RBP19.32■□□□□ 0.68
CLDN4-201ENST00000340958 MUTP22033 750 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 ADORA2AP29274 412 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 MYL5Q02045 173 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 SP3Q02447 781 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 SEMA3FQ13275 785 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 B3GNT9Q6UX72 402 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 DPP9Q86TI2 863 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 PIGOQ8TEQ8 1089 aa19.32■□□□□ 0.68
CLDN4-201ENST00000340958 CCDC43Q96MW1 224 aaKnown RBP19.32■□□□□ 0.68
CLDN4-201ENST00000340958 GTPBP4Q9BZE4 634 aaKnown RBP19.32■□□□□ 0.68
CLDN4-201ENST00000340958 BHMT2Q9H2M3 363 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms