RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CETN2P41208 172 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 GPC3P51654 580 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 DHX9Q08211 1270 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 HSP90AA5PQ58FG0 334 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 IL23RQ5VWK5 629 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 ALDH16A1Q8IZ83 802 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 LSMEM2Q8N112 164 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 C8orf48Q96LL4 319 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 AGAP1Q9UPQ3 857 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 OVOS2A0A0G2JMS6 1433 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 OVOS2A0A0J9YW53 1432 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 OVOS2Q6IE36 1432 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 F8W031 263 aaPredicted RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 LDHCP07864 332 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 TMPOP42166 694 aaKnown RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 DR1Q01658 176 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 NR1D2Q14995 579 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 C15orf59Q2T9L4 293 aaPredicted RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 ANKDD1AQ495B1 522 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 FAM20CQ8IXL6 584 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 FAM129AQ9BZQ8 928 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 PIH1D3Q9NQM4 214 aaKnown RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 TRIM17Q9Y577 477 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 NUP155O75694 1391 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 FAM47E-STBD1D6RA91 191 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 SERPINB6P35237 376 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 ETV3P41162 512 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 B3GNT6Q6ZMB0 384 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 TREML1Q86YW5 311 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
TDP1-201ENST00000335725 RUFY2Q8WXA3 655 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 CNGB3Q9NQW8 809 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 STK39Q9UEW8 545 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 A8MUI8 341 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 PTPN2P17706 415 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 PRKACBP22694 351 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 ACADSBP45954 432 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 ARFIP2P53365 341 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 C2orf54Q08AI8 447 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 GALNTL6Q49A17 601 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 TMTC4Q5T4D3 741 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 ERMARDQ5T6L9 678 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 NUTM2AQ8IVF1 878 aaPredicted RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 SAMD14Q8IZD0 417 aaPredicted RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 CYP4X1Q8N118 509 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 ENOX1Q8TC92 643 aaKnown RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 LRRC8CQ8TDW0 803 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 EFHD2Q96C19 240 aaPredicted RBP9.32□□□□□ -0.92
TDP1-201ENST00000335725 EPB41L1Q9H4G0 881 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 PLCB1Q9NQ66 1216 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 GUCA1BQ9UMX6 200 aa9.32□□□□□ -0.92
TDP1-201ENST00000335725 NOTOA8MTQ0 251 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 KMOO15229 486 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 SGTAO43765 313 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 CTNND1O60716 968 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 SUN1O94901 812 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ZBED1O96006 694 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 A1BGP04217 495 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ST3GAL1Q11201 340 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 TMEM214Q6NUQ4 689 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 UNC13DQ70J99 1090 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ZNF572Q7Z3I7 529 aaPredicted RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 FERMT2Q96AC1 680 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 PBKQ96KB5 322 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 DDX23Q9BUQ8 820 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 CEP44Q9C0F1 390 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 TXLNGQ9NUQ3 528 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 TMCC3Q9ULS5 477 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 FAF1Q9UNN5 650 aaPredicted RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 ABCC3O15438 1527 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 PABPN1LA6NDY0 278 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 ADCY3O60266 1144 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 PEX11AO75192 247 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 FECHP22830 423 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 PAFAH1B1P43034 410 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ZCWPW2Q504Y3 356 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 PPP2R2DQ66LE6 453 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 Q6ZNX1 250 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ZBED8Q8IZ13 594 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 DGCR14Q96DF8 476 aaKnown RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 TCF12Q99081 682 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 LRRC1Q9BTT6 524 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 KLHL4Q9C0H6 718 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 NMRK1Q9NWW6 199 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.31□□□□□ -0.92
TDP1-201ENST00000335725 NKX1-2Q9UD57 310 aaPredicted RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 STAP2Q9UGK3 403 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 ZMYND8Q9ULU4 1186 aaPredicted RBP9.31□□□□□ -0.92
TDP1-201ENST00000335725 TRAPPC8Q9Y2L5 1435 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 SNX9Q9Y5X1 595 aa9.31□□□□□ -0.92
TDP1-201ENST00000335725 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms