RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CCDC13Q8IYE1 715 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 DNAJC19Q96DA6 116 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 PBKQ96KB5 322 aa18.37■□□□□ 0.53
SSH1-201ENST00000326470 PPANQ9NQ55 473 aaKnown RBP18.37■□□□□ 0.53
SSH1-201ENST00000326470 BHMG1C9JSJ3 638 aaPredicted RBP18.36■□□□□ 0.53
SSH1-201ENST00000326470 KCNK3O14649 394 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 RASSF9O75901 435 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 UAP1Q16222 522 aaPredicted RBP18.36■□□□□ 0.53
SSH1-201ENST00000326470 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 PIGSQ96S52 555 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 ANKRD2Q9GZV1 360 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 SLC12A6Q9UHW9 1150 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.36■□□□□ 0.53
SSH1-201ENST00000326470 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
SSH1-201ENST00000326470 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
SSH1-201ENST00000326470 GMNCA6NCL1 334 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 CHUKO15111 745 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 KIF4AO95239 1232 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 USP11P51784 963 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 ARID5AQ03989 594 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 BIRC3Q13489 604 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 ASIC2Q16515 512 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 C10orf76Q5T2E6 689 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 RPAINQ86UA6 219 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 FAM133AQ8N9E0 248 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 ACTRT1Q8TDG2 376 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 KLC4Q9NSK0 619 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 EDIL3O43854 480 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 TDP2O95551 362 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 ZNF844Q08AG5 666 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 RUFY4Q6ZNE9 571 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 CALR3Q96L12 384 aaKnown RBP18.35■□□□□ 0.53
SSH1-201ENST00000326470 CENPHQ9H3R5 247 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 CXorf56Q9H5V9 222 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 VAT1LQ9HCJ6 419 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
SSH1-201ENST00000326470 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 JPH2Q9BR39 696 aaPredicted RBP18.34■□□□□ 0.53
SSH1-201ENST00000326470 GANQ9H2C0 597 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 ACTR5Q9H9F9 607 aaPredicted RBP18.34■□□□□ 0.53
SSH1-201ENST00000326470 ZNF287Q9HBT7 754 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 TRAPPC3O43617 180 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
SSH1-201ENST00000326470 CCDC121Q6ZUS5 278 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 OR2W6PQ8NHA6 318 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 TGFBRAP1Q8WUH2 860 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 PANK4Q9NVE7 773 aa18.34■□□□□ 0.53
SSH1-201ENST00000326470 hCG_1984214I3L0E3 225 aa18.33■□□□□ 0.53
SSH1-201ENST00000326470 ECM1Q16610 540 aa18.33■□□□□ 0.53
SSH1-201ENST00000326470 TXNRD3Q86VQ6 643 aa18.33■□□□□ 0.53
SSH1-201ENST00000326470 ZNF713Q8N859 430 aaPredicted RBP18.33■□□□□ 0.53
SSH1-201ENST00000326470 DDX20Q9UHI6 824 aaKnown RBP18.33■□□□□ 0.53
SSH1-201ENST00000326470 A0A0G2JS52 829 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 CEP104O60308 925 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 BAG3O95817 575 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
SSH1-201ENST00000326470 PPP4CP60510 307 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 ENOX2Q16206 610 aaKnown RBP18.33■□□□□ 0.52
SSH1-201ENST00000326470 IFI16Q16666 785 aaKnown RBP18.33■□□□□ 0.52
SSH1-201ENST00000326470 AGBL2Q5U5Z8 902 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 LRRC57Q8N9N7 239 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 ZKSCAN4Q969J2 545 aaPredicted RBP18.33■□□□□ 0.52
SSH1-201ENST00000326470 EYA3Q99504 573 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 TACO1Q9BSH4 297 aaKnown RBP18.33■□□□□ 0.52
SSH1-201ENST00000326470 SLC40A1Q9NP59 571 aa18.33■□□□□ 0.52
SSH1-201ENST00000326470 SART1O43290 800 aaKnown RBP18.32■□□□□ 0.52
SSH1-201ENST00000326470 MTMR3Q13615 1198 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 DDX42Q86XP3 938 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSH1-201ENST00000326470 NEDD1Q8NHV4 660 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 NEUROG2Q9H2A3 272 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 RIOX1Q9H6W3 641 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 CD248Q9HCU0 757 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 PAEPP09466 180 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 ZBTB48P10074 688 aaPredicted RBP18.32■□□□□ 0.52
SSH1-201ENST00000326470 PTK2Q05397 1052 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSH1-201ENST00000326470 FGFBP2Q9BYJ0 223 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
SSH1-201ENST00000326470 PCDHA2Q9Y5H9 948 aa18.32■□□□□ 0.52
SSH1-201ENST00000326470 SNED1Q8TER0 1413 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 PGRMC1O00264 195 aaKnown RBP18.31■□□□□ 0.52
SSH1-201ENST00000326470 CCDC172P0C7W6 258 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 CDK8P49336 464 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 PPP2R2AP63151 447 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 IRF2BP2Q7Z5L9 587 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
SSH1-201ENST00000326470 MARCH10Q8NA82 808 aaPredicted RBP18.31■□□□□ 0.52
SSH1-201ENST00000326470 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 SAP30BPQ9UHR5 308 aaKnown RBP18.31■□□□□ 0.52
SSH1-201ENST00000326470 GOLGA6L7A0A1B0GV03 622 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 CCDC188H7C350 402 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 TMOD1P28289 359 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 ADCY7P51828 1080 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 GSTO1P78417 241 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 ZNF571Q7Z3V5 609 aaPredicted RBP18.31■□□□□ 0.52
SSH1-201ENST00000326470 MAPKAPK5Q8IW41 473 aa18.31■□□□□ 0.52
SSH1-201ENST00000326470 NELFCDQ8IXH7 590 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms