RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 GPS2Q13227 327 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 CYP2W1Q8TAV3 490 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 DEF6Q9H4E7 631 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 VAV3Q9UKW4 847 aa17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
TSC22D3-201ENST00000315660 CCDC151A5D8V7 595 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 RCCD1A6NED2 376 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 TFRCP02786 760 aaKnown RBP17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 HNRNPH2P55795 449 aaKnown RBP17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 PABPC4Q13310 644 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 CACNA2D4Q7Z3S7 1137 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 SYT2Q8N9I0 419 aaPredicted RBP17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 FUT8Q9BYC5 575 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 LACRTQ9GZZ8 138 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 COL4A5P29400 1685 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 VAV2P52735 878 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 BRD3Q15059 726 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 RRAGAQ7L523 313 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 KCTD17Q8N5Z5 321 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 CHURC1Q8WUH1 139 aa17.28■□□□□ 0.36
TSC22D3-201ENST00000315660 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 CYP27A1Q02318 531 aa17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 GIT2Q14161 759 aa17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 CCDC155Q8N6L0 562 aa17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 BAP1Q92560 729 aa17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 NUCKS1Q9H1E3 243 aaKnown RBP17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 VEZTQ9HBM0 779 aa17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 ARHGAP20Q9P2F6 1191 aa17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 GOLGB1Q14789 3259 aaKnown RBP17.27■□□□□ 0.36
TSC22D3-201ENST00000315660 IGLV3-22A0A075B6J6 115 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 LRRC53A6NM62 1247 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 ZNF263O14978 683 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 MARSP56192 900 aaKnown RBP17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 KCNMA1Q12791 1236 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 LONRF2Q1L5Z9 754 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 EDRF1Q3B7T1 1238 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 TRAPPC11Q7Z392 1133 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 CDAN1Q8IWY9 1227 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 ZC3H3Q8IXZ2 948 aaKnown RBP17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 TBC1D5Q92609 795 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 SH2D4AQ9H788 454 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 SAR1BQ9Y6B6 198 aa17.27■□□□□ 0.35
TSC22D3-201ENST00000315660 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 CETN3O15182 167 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 CFBP00751 764 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 ADAM9Q13443 819 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 SECISBP2LQ93073 1101 aaKnown RBP17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 REEP2Q9BRK0 252 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 POLR3CQ9BUI4 534 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 RANBP17Q9H2T7 1088 aaKnown RBP17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 SMCHD1A6NHR9 2005 aa17.26■□□□□ 0.35
TSC22D3-201ENST00000315660 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 AKR1B10O60218 316 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 TUBBP07437 444 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 EPS15P42566 896 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 CASP5P51878 434 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 KIF11P52732 1056 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 FKBP1CQ5VVH2 108 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 KRT26Q7Z3Y9 468 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 PURBQ96QR8 312 aaKnown RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 TMEM39BQ9GZU3 492 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 VCPKMTQ9H867 229 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 ANKZF1Q9H8Y5 726 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 ANO9A1A5B4 782 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 TULP2O00295 520 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 EML1O00423 815 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 ENC1O14682 589 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 TBC1D12O60347 775 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 KCNA3P22001 575 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 EIF4A3P38919 411 aaKnown RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 PAPD7Q5XG87 772 aaKnown RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 WDR18Q9BV38 432 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 CEP72Q9P209 647 aa17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 MRPL11Q9Y3B7 192 aaKnown RBP17.25■□□□□ 0.35
TSC22D3-201ENST00000315660 MACROD2A1Z1Q3 448 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 TBCAO75347 108 aaKnown RBP17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 ATP1A1P05023 1023 aaKnown RBP17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 DPEP1P16444 411 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
TSC22D3-201ENST00000315660 FAM160B2Q86V87 743 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms