RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 USP17L10C9JJH3 530 aa17.77■□□□□ 0.44
BRD3-201ENST00000303407 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
BRD3-201ENST00000303407 GABPB2Q8TAK5 448 aaPredicted RBP17.77■□□□□ 0.44
BRD3-201ENST00000303407 CCT6BQ92526 530 aa17.77■□□□□ 0.44
BRD3-201ENST00000303407 CCDC151A5D8V7 595 aa17.77■□□□□ 0.43
BRD3-201ENST00000303407 ORC4O43929 436 aa17.77■□□□□ 0.43
BRD3-201ENST00000303407 HACE1Q8IYU2 909 aa17.77■□□□□ 0.43
BRD3-201ENST00000303407 IL25Q9H293 177 aa17.77■□□□□ 0.43
BRD3-201ENST00000303407 DAAM1Q9Y4D1 1078 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 ADAMTS13Q76LX8 1427 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 MMP10P09238 476 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 SPATS2Q86XZ4 545 aaKnown RBP17.76■□□□□ 0.43
BRD3-201ENST00000303407 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 TROVE2P10155 538 aaKnown RBP eCLIP17.76■□□□□ 0.43
BRD3-201ENST00000303407 MAN1A1P33908 653 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 SNX1Q13596 522 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 ANKRD36BP1Q96IX9 119 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 ABCB6Q9NP58 842 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 KIF20BQ96Q89 1820 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 TMOD1P28289 359 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 SLC7A5Q01650 507 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 SESTD1Q86VW0 696 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 TXNRD1Q16881 649 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 MIS12Q9H081 205 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 HESX1Q9UBX0 185 aa17.76■□□□□ 0.43
BRD3-201ENST00000303407 SARNPP82979 210 aaKnown RBP17.75■□□□□ 0.43
BRD3-201ENST00000303407 KLHL14Q9P2G3 628 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 FBXO2Q9UK22 296 aaPredicted RBP17.75■□□□□ 0.43
BRD3-201ENST00000303407 CEP170BQ9Y4F5 1589 aaPredicted RBP17.75■□□□□ 0.43
BRD3-201ENST00000303407 PP2D1A8MPX8 630 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 KCNQ2O43526 872 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 DMTNQ08495 405 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 KCTD2Q14681 263 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 TTBK2Q6IQ55 1244 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 RFX6Q8HWS3 928 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 PIGOQ8TEQ8 1089 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 HAUS1Q96CS2 278 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 RIOK1Q9BRS2 568 aaKnown RBP17.75■□□□□ 0.43
BRD3-201ENST00000303407 PSAPP07602 524 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 PCK1P35558 622 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 COASYQ13057 564 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 TBC1D31Q96DN5 1066 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 CEP72Q9P209 647 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 STK38LQ9Y2H1 464 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L15C9J2P7 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L13C9JLJ4 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L11C9JVI0 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L18D6R9N7 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L22D6RA61 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L17D6RBQ6 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L19D6RCP7 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L20D6RJB6 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 E9PMD0 336 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L24Q0WX57 530 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 MTERF2Q49AM1 385 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 FAM83BQ5T0W9 1011 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 ZNF772Q68DY9 489 aaPredicted RBP17.75■□□□□ 0.43
BRD3-201ENST00000303407 USP17L6PQ6QN14 398 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 NSMCE1Q8WV22 266 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 ZNF341Q9BYN7 854 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 SEPT10Q9P0V9 454 aa17.75■□□□□ 0.43
BRD3-201ENST00000303407 ATP2C1P98194 919 aaPredicted RBP17.74■□□□□ 0.43
BRD3-201ENST00000303407 SGO2Q562F6 1265 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 AFAP1L2Q8N4X5 818 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ATP2A3Q93084 1043 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 RNF8O76064 485 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 EIF2AK2P19525 551 aaKnown RBP17.74■□□□□ 0.43
BRD3-201ENST00000303407 CCT5P48643 541 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 MXI1P50539 228 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ANKRD20A3Q5VUR7 823 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ARHGAP24Q8N264 748 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 FAM81BQ96LP2 452 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 GOLGA8IPA6NC78 632 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 GOLGA8JA6NMD2 632 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 SGK1O00141 431 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ALCAMQ13740 583 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ATP8A1Q9Y2Q0 1164 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 CEMIPQ8WUJ3 1361 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ECE2O60344 883 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 PLTPP55058 493 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 PDIA6Q15084 440 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
BRD3-201ENST00000303407 SFR1Q86XK3 245 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 ADGRF4Q8IZF3 695 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 SRBD1Q8N5C6 995 aaKnown RBP17.74■□□□□ 0.43
BRD3-201ENST00000303407 RILPQ96NA2 401 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 AP1M1Q9BXS5 423 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 RINT1Q6NUQ1 792 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 CDHR1Q96JP9 859 aa17.74■□□□□ 0.43
BRD3-201ENST00000303407 CAPN9O14815 690 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 ECEL1O95672 775 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 CSF1RP07333 972 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 RXRBP28702 533 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 LMNB2Q03252 620 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 LRRC53A6NM62 1247 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 TEX33O43247 280 aa17.73■□□□□ 0.43
BRD3-201ENST00000303407 ORC2Q13416 577 aaPredicted RBP17.73■□□□□ 0.43
BRD3-201ENST00000303407 CASP8Q14790 479 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms