RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 E2F6O75461 281 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 CUL3Q13618 768 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 RNF217Q8TC41 542 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 EPC1Q9H2F5 836 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 POLR3EQ9NVU0 708 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 RASA4BC9J798 803 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 RASA4O43374 803 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 HAUS5O94927 633 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 FGGP02679 453 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 ICA1LQ8NDH6 482 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 NUDCD1Q96RS6 583 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 APOBEC2Q9Y235 224 aaKnown RBP15.99■□□□□ 0.15
SCN3B-201ENST00000299333 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 USP17L21D6R901 530 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 SERPING1P05155 500 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 KPNA2P52292 529 aaKnown RBP15.99■□□□□ 0.15
SCN3B-201ENST00000299333 THOC5Q13769 683 aaKnown RBP15.99■□□□□ 0.15
SCN3B-201ENST00000299333 CDC26Q8NHZ8 85 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 LRRC37BQ96QE4 947 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 TRPC1P48995 793 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 SLFNL1Q499Z3 407 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 CENPUQ71F23 418 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 RHBDL2Q9NX52 303 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 DCTN4Q9UJW0 460 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
SCN3B-201ENST00000299333 NBPF26B4DH59 902 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 ODR4Q5SWX8 454 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 NBPF15Q8N660 670 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 LARP4BQ92615 738 aaKnown RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 NCLNQ969V3 563 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 STX18Q9P2W9 335 aaKnown RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 TEKT2Q9UIF3 430 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 SNX24Q9Y343 169 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 RTCBQ9Y3I0 505 aaKnown RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 RNF103-CHMP3A0A140T963 221 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 PSMC2P35998 433 aaKnown RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 DMP1Q13316 513 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 GCKRQ14397 625 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 CCDC85BQ15834 202 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 SLC44A4Q53GD3 710 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 ANO5Q75V66 913 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 RYBPQ8N488 228 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 CALN1Q9BXU9 219 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 MAGEF1Q9HAY2 307 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 RWDD2AQ9UIY3 292 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 CARMIL3Q8ND23 1372 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 BRDTQ58F21 947 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 PPP2R2AP63151 447 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 YWHAHQ04917 246 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 EPM2AIP1Q7L775 607 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 TLK2Q86UE8 772 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 ZBTB8OSQ8IWT0 167 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 JDP2Q8WYK2 163 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 SAYSD1Q9NPB0 183 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 ARPP21Q9UBL0 812 aaPredicted RBP15.98■□□□□ 0.15
SCN3B-201ENST00000299333 ABCC1P33527 1531 aa15.98■□□□□ 0.15
SCN3B-201ENST00000299333 HLA-DPA1P20036 260 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 LSG1Q9H089 658 aaKnown RBP15.97■□□□□ 0.15
SCN3B-201ENST00000299333 STK17AQ9UEE5 414 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 COPEO14579 308 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 KRT31Q15323 416 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 FBXW10Q5XX13 1052 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 KCTD6Q8NC69 237 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 TRAF3IP3Q9Y228 551 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 KRT8P05787 483 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 IL2RBP14784 551 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 DDX42Q86XP3 938 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCN3B-201ENST00000299333 SRRM1Q8IYB3 904 aaKnown RBP15.97■□□□□ 0.15
SCN3B-201ENST00000299333 PNMA1Q8ND90 353 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
SCN3B-201ENST00000299333 CLIC2O15247 247 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 KRT4P19013 534 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 DDIT3P35638 169 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 SRLQ86TD4 932 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 SH3GL1Q99961 368 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 DIABLOQ9NR28 239 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 GCNT4Q9P109 453 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 KLRF2D3W0D1 207 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 MAFGO15525 162 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 MFAP3LO75121 409 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 FGAP02671 866 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 NOP9Q86U38 636 aaKnown RBP15.97■□□□□ 0.15
SCN3B-201ENST00000299333 SDR42E1Q8WUS8 393 aa15.97■□□□□ 0.15
SCN3B-201ENST00000299333 IPO5O00410 1097 aaKnown RBP15.96■□□□□ 0.15
SCN3B-201ENST00000299333 SNRNP27Q8WVK2 155 aaKnown RBP15.96■□□□□ 0.15
SCN3B-201ENST00000299333 CHL1O00533 1208 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 HDAC4P56524 1084 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 PABPC4Q13310 644 aaKnown RBP eCLIP15.96■□□□□ 0.15
SCN3B-201ENST00000299333 LINC00301Q8NCQ3 95 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 EXT2Q93063 718 aa15.96■□□□□ 0.15
SCN3B-201ENST00000299333 OLA1Q9NTK5 396 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms