RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CREG2Q8IUH2 290 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 RTKN2Q8IZC4 609 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 CALCOCO1Q9P1Z2 691 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 FAM198AQ9UFP1 575 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 TSKSQ9UJT2 592 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 CAPN6Q9Y6Q1 641 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 FER1L6Q2WGJ9 1857 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 MACROD2A1Z1Q3 448 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 E9PMD0 336 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 TRAF5O00463 557 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 NOL4O94818 638 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 SERPING1P05155 500 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 SREBF1P36956 1147 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 SCFD1Q8WVM8 642 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 AMNQ9BXJ7 453 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 HYOU1Q9Y4L1 999 aa27.66■■■□□ 2.02
ROM1-201ENST00000278833 POTEB3A0JP26 581 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 POTECB2RU33 542 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 SRGAP2O75044 1071 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 ARHGAP4P98171 946 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 POTEBQ6S5H4 581 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 BTNL9Q6UXG8 535 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 CACNA2D4Q7Z3S7 1137 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 SIAH1Q8IUQ4 282 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 ZFPM1Q8IX07 1006 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 ERMNQ8TAM6 284 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 FAM20AQ96MK3 541 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 ATP8B3O60423 1300 aa27.65■■■□□ 2.02
ROM1-201ENST00000278833 USP17L15C9J2P7 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L13C9JLJ4 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L11C9JVI0 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L18D6R9N7 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L22D6RA61 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L17D6RBQ6 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L19D6RCP7 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L20D6RJB6 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 PDE2AO00408 941 aaPredicted RBP27.64■■■□□ 2.02
ROM1-201ENST00000278833 MAGEA1P43355 309 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 ATP2B2Q01814 1243 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 RASSF7Q02833 373 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L24Q0WX57 530 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 SLC9C1Q4G0N8 1177 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 DACT2Q5SW24 774 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 USP17L6PQ6QN14 398 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 ZCCHC17Q9NP64 241 aaKnown RBP27.64■■■□□ 2.02
ROM1-201ENST00000278833 LUC7LQ9NQ29 371 aaKnown RBP27.64■■■□□ 2.02
ROM1-201ENST00000278833 SERPINA10Q9UK55 444 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 ADAM21Q9UKJ8 722 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 TRAF3IP3Q9Y228 551 aa27.64■■■□□ 2.02
ROM1-201ENST00000278833 RPA1P27694 616 aa27.64■■■□□ 2.01
ROM1-201ENST00000278833 MUM1L1Q5H9M0 696 aa27.64■■■□□ 2.01
ROM1-201ENST00000278833 LENG9Q96B70 501 aa27.64■■■□□ 2.01
ROM1-201ENST00000278833 G3V3G9 751 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 MED24O75448 989 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 ICA1Q05084 483 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 GRIPAP1Q4V328 841 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 DCAF8Q5TAQ9 597 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 CCDC70Q6NSX1 233 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 SH3BP5LQ7L8J4 393 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 CAGE1Q8TC20 777 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 TAOK3Q9H2K8 898 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 EMILIN3Q9NT22 766 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 PSME4Q14997 1843 aa27.63■■■□□ 2.01
ROM1-201ENST00000278833 DDTLA6NHG4 134 aaPredicted RBP27.62■■■□□ 2.01
ROM1-201ENST00000278833 BMT2Q1RMZ1 405 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 ARSHQ5FYA8 562 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 FAM83BQ5T0W9 1011 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 SFMBT2Q5VUG0 894 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 EPM2AIP1Q7L775 607 aaPredicted RBP27.62■■■□□ 2.01
ROM1-201ENST00000278833 SYT2Q8N9I0 419 aaPredicted RBP27.62■■■□□ 2.01
ROM1-201ENST00000278833 FGFBP2Q9BYJ0 223 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 SUGCTQ9HAC7 445 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 JADE2Q9NQC1 790 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 RNF14Q9UBS8 474 aa27.62■■■□□ 2.01
ROM1-201ENST00000278833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.62■■■□□ 2.01
ROM1-201ENST00000278833 LRRIQ3A6PVS8 624 aaPredicted RBP27.61■■■□□ 2.01
ROM1-201ENST00000278833 CYP3A4P08684 503 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 CAPZA3Q96KX2 299 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 TANGO6Q9C0B7 1094 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 MLXIPQ9HAP2 919 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 AIPL1Q9NZN9 384 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 ENTPD3O75355 529 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 PRELPP51888 382 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 HERC4Q5GLZ8 1057 aaPredicted RBP27.61■■■□□ 2.01
ROM1-201ENST00000278833 FRMD5Q7Z6J6 570 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 OSBPL9Q96SU4 736 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 PSMD1Q99460 953 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 GANQ9H2C0 597 aa27.61■■■□□ 2.01
ROM1-201ENST00000278833 PIK3CDO00329 1044 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 TLR2O60603 784 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 MOCS3O95396 460 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 TNFRSF8P28908 595 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 SYDE2Q5VT97 1194 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 CCNI2Q6ZMN8 369 aaPredicted RBP27.6■■■□□ 2.01
ROM1-201ENST00000278833 FBXO11Q86XK2 927 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 COG1Q8WTW3 980 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 GJA10Q969M2 543 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 NOX5Q96PH1 765 aa27.6■■■□□ 2.01
ROM1-201ENST00000278833 LSM14BQ9BX40 385 aaKnown RBP27.6■■■□□ 2.01
ROM1-201ENST00000278833 PLCB1Q9NQ66 1216 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms