RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 USP17L19D6RCP7 530 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 USP17L20D6RJB6 530 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 MYL1P05976 194 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 STAT2P52630 851 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 USP17L24Q0WX57 530 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 LRRC41Q15345 812 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 USP17L6PQ6QN14 398 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 UBL4BQ8N7F7 174 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 ANKRD42Q8N9B4 389 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 HPCAL4Q9UM19 191 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 NOVA2Q9UNW9 492 aaKnown RBP18.65■□□□□ 0.58
TRPC1-201ENST00000273482 GINS2Q9Y248 185 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 HMGB1P1B2RPK0 211 aaPredicted RBP18.65■□□□□ 0.58
TRPC1-201ENST00000273482 USP17L10C9JJH3 530 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 GNA14O95837 355 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 SLC15A2Q16348 729 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 TMEM179Q6ZVK1 233 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 NEDD1Q8NHV4 660 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 POLD4Q9HCU8 107 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 ARMCX3Q9UH62 379 aaPredicted RBP18.65■□□□□ 0.58
TRPC1-201ENST00000273482 ASIC3Q9UHC3 531 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 ARL6IP4Q66PJ3 421 aaKnown RBP18.65■□□□□ 0.58
TRPC1-201ENST00000273482 KRT26Q7Z3Y9 468 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 SPATA4Q8NEY3 305 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 NT5C3AQ9H0P0 336 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 PCDHB13Q9Y5F0 798 aa18.65■□□□□ 0.58
TRPC1-201ENST00000273482 PLCG1P19174 1290 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 PEX19P40855 299 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 DCPSQ96C86 337 aaKnown RBP18.64■□□□□ 0.57
TRPC1-201ENST00000273482 OSBPL9Q96SU4 736 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 ZNF341Q9BYN7 854 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 ACTR5Q9H9F9 607 aaPredicted RBP18.64■□□□□ 0.57
TRPC1-201ENST00000273482 STAT1P42224 750 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 IRAK1P51617 712 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 PABPC4Q13310 644 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRPC1-201ENST00000273482 PTPAQ15257 358 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 CCNI2Q6ZMN8 369 aaPredicted RBP18.64■□□□□ 0.57
TRPC1-201ENST00000273482 LMNTD2Q8IXW0 634 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 LRRC1Q9BTT6 524 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 HOMER3Q9NSC5 361 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 LRRC4BQ9NT99 713 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 HPSEQ9Y251 543 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 ATP8A1Q9Y2Q0 1164 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 IKBKGQ9Y6K9 419 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 XRCC5P13010 732 aaKnown RBP18.64■□□□□ 0.57
TRPC1-201ENST00000273482 GADL1Q6ZQY3 521 aa18.64■□□□□ 0.57
TRPC1-201ENST00000273482 DHX9Q08211 1270 aaKnown RBP18.63■□□□□ 0.57
TRPC1-201ENST00000273482 SYDE2Q5VT97 1194 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 MSANTD4Q8NCY6 345 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 PPP1R12CQ9BZL4 782 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 INTS9Q9NV88 658 aaKnown RBP18.63■□□□□ 0.57
TRPC1-201ENST00000273482 LIMA1Q9UHB6 759 aaKnown RBP18.63■□□□□ 0.57
TRPC1-201ENST00000273482 ADAMTS1Q9UHI8 967 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 CLGNO14967 610 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 PLAAQ9Y263 795 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 FRMD4BQ9Y2L6 1034 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 PLCB3Q01970 1234 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 ARHGEF16Q5VV41 709 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 LRRC31Q6UY01 552 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 AS3MTQ9HBK9 375 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 PNMA6FA0A0J9YX94 578 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 F5H6K3 240 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 MEIS1O00470 390 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 CALUO43852 315 aaPredicted RBP18.63■□□□□ 0.57
TRPC1-201ENST00000273482 FKBP3Q00688 224 aaKnown RBP18.63■□□□□ 0.57
TRPC1-201ENST00000273482 KLRC3Q07444 240 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 SH2D3CQ8N5H7 860 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■■■■ 96.1
TRPC1-201ENST00000273482 TMEM260Q9NX78 707 aa18.63■□□□□ 0.57
TRPC1-201ENST00000273482 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 NCK2O43639 380 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 ADAM9Q13443 819 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 GLE1Q53GS7 698 aaKnown RBP18.62■□□□□ 0.57
TRPC1-201ENST00000273482 TTBK2Q6IQ55 1244 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 LARP4BQ92615 738 aaKnown RBP18.62■□□□□ 0.57
TRPC1-201ENST00000273482 AK8Q96MA6 479 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 KCND1Q9NSA2 647 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 PGRMC1O00264 195 aaKnown RBP18.62■□□□□ 0.57
TRPC1-201ENST00000273482 ACTN3Q08043 901 aaPredicted RBP18.62■□□□□ 0.57
TRPC1-201ENST00000273482 CDC42EP5Q6NZY7 148 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 MIER3Q7Z3K6 550 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 ANKRD35Q8N283 1001 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 CPSF2Q9P2I0 782 aaKnown RBP18.62■□□□□ 0.57
TRPC1-201ENST00000273482 LRRIQ3A6PVS8 624 aaPredicted RBP18.62■□□□□ 0.57
TRPC1-201ENST00000273482 MTA3Q9BTC8 594 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 TCHHQ07283 1943 aa18.62■□□□□ 0.57
TRPC1-201ENST00000273482 LAD1O00515 517 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
TRPC1-201ENST00000273482 RIOK1Q9BRS2 568 aaKnown RBP18.61■□□□□ 0.57
TRPC1-201ENST00000273482 PANK4Q9NVE7 773 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 CAPN11Q9UMQ6 739 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 IVNS1ABPQ9Y6Y0 642 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 ITIH6Q6UXX5 1313 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 FOSP01100 380 aaPredicted RBP18.61■□□□□ 0.57
TRPC1-201ENST00000273482 GUCY2CP25092 1073 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 GUCY1A3Q02108 690 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 ANKZF1Q9H8Y5 726 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 LCMT1Q9UIC8 334 aa18.61■□□□□ 0.57
TRPC1-201ENST00000273482 CEP83Q9Y592 693 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms