RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 LAPTM5Q13571 262 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 ISM2Q6H9L7 571 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 ATG9AQ7Z3C6 839 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 SLC7A5P1Q8MH63 180 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 DHTKD1Q96HY7 919 aaPredicted RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 ZMAT2Q96NC0 199 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 SRPK1Q96SB4 655 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 BICC1Q9H694 974 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 CALCOCO1Q9P1Z2 691 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 NOB1Q9ULX3 412 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 TMX2Q9Y320 296 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 DDX60LQ5H9U9 1706 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 KLHL41O60662 606 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 FMNL1O95466 1100 aaPredicted RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 MTHFD1P11586 935 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 NUCB2P80303 420 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 DEUP1Q05D60 604 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 RABEP1Q15276 862 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 ECM1Q16610 540 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 ARSHQ5FYA8 562 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 TBC1D9Q6ZT07 1266 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 CCDC80Q76M96 950 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 GALNT5Q7Z7M9 940 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 ITPRIPQ8IWB1 547 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 ENAHQ8N8S7 591 aaPredicted RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 AFAP1L1Q8TED9 768 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 CSRNP2Q9H175 543 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 CNNM1Q9NRU3 951 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 SEPT10Q9P0V9 454 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 NOVA2Q9UNW9 492 aaKnown RBP6.3□□□□□ -1.4
ITCH-201ENST00000262650 PCDHGB7Q9Y5F8 929 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 AK9Q5TCS8 1911 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 GAKO14976 1311 aa6.3□□□□□ -1.4
ITCH-201ENST00000262650 FRMPD3Q5JV73 1810 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 ZBTB7BO15156 539 aaPredicted RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 KPNA6O60684 536 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 CD9P21926 228 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 GYG1P46976 350 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 NASPP49321 788 aaPredicted RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 RENBPP51606 427 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 NUBP1P53384 320 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 RAC1P63000 192 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 SP3Q02447 781 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 PPATQ06203 517 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 MTX1Q13505 466 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 CNGA3Q16281 694 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 GRIK5Q16478 980 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 PPP2R2DQ66LE6 453 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 OLFML1Q6UWY5 402 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 ERO1BQ86YB8 467 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 FAM151AQ8WW52 585 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 OPTNQ96CV9 577 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 THOC1Q96FV9 657 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 NAF1Q96HR8 494 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 SH3GL1Q99961 368 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 EIF2AK1Q9BQI3 630 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 HERPUD2Q9BSE4 406 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 LRRCC1Q9C099 1032 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 GPHNQ9NQX3 736 aaPredicted RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 ATP8A2Q9NTI2 1148 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 SCAF8Q9UPN6 1271 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 ESYT3A0FGR9 886 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 EYA2O00167 538 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 NEMFO60524 1076 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 BAG4O95429 457 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 KRT10P13645 584 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 CA8P35219 290 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 MXI1P50539 228 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 USP11P51784 963 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 VGLL4Q14135 290 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 FKBP15Q5T1M5 1219 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 C17orf99Q6UX52 265 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 SPATA18Q8TC71 538 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 ARHGEF2Q92974 986 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 SCLT1Q96NL6 688 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 TSGA13Q96PP4 275 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 UBAP1Q9NZ09 502 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 PDE4DIPQ5VU43 2346 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 KIF2AO00139 706 aaPredicted RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 PAHP00439 452 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 CETPP11597 493 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 LRRC24Q50LG9 513 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 PRR7Q8TB68 274 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 LPIN2Q92539 896 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 DDX12PQ92771 950 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 ATP6V1E2Q96A05 226 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 IDI2Q9BXS1 227 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 TDRD3Q9H7E2 651 aaKnown RBP6.29□□□□□ -1.4
ITCH-201ENST00000262650 ZFYVE28Q9HCC9 887 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 PCDHGB3Q9Y5G1 929 aa6.29□□□□□ -1.4
ITCH-201ENST00000262650 CLRN2A0PK11 232 aa6.28□□□□□ -1.4
ITCH-201ENST00000262650 H3BRB1 525 aa6.28□□□□□ -1.4
ITCH-201ENST00000262650 TLR2O60603 784 aa6.28□□□□□ -1.4
ITCH-201ENST00000262650 APBB3O95704 486 aa6.28□□□□□ -1.4
ITCH-201ENST00000262650 MATR3P43243 847 aaKnown RBP eCLIP6.28□□□□□ -1.48e-7■■■□□ 18.4
ITCH-201ENST00000262650 MRPS35P82673 323 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms