RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 MAGOHP61326 146 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FAM83BQ5T0W9 1011 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FAM102BQ5T8I3 360 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 KAZNQ674X7 775 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 VPS52Q8N1B4 723 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 POMGNT1Q8WZA1 660 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 BHMT2Q9H2M3 363 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 AZI2Q9H6S1 392 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 WTIPA6NIX2 430 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FAM196BA6NMK8 535 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L15C9J2P7 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L13C9JLJ4 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L11C9JVI0 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L18D6R9N7 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L22D6RA61 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L17D6RBQ6 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L19D6RCP7 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L20D6RJB6 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ATP11AP98196 1134 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ICA1Q05084 483 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L24Q0WX57 530 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 LRCH2Q5VUJ6 765 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TBC1D9BQ66K14 1250 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 PDXDC2PQ6P474 469 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP17L6PQ6QN14 398 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 MMS22LQ6ZRQ5 1243 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TAOK1Q7L7X3 1001 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ELAC2Q9BQ52 826 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 JPH2Q9BR39 696 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TRIM9Q9C026 710 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 NBPF3Q9H094 633 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 LEMD3Q9Y2U8 911 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 KDM6AO15550 1401 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SPATA31D1Q6ZQQ2 1576 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TARSL2A2RTX5 802 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 GOLGA8IPA6NC78 632 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 GOLGA8JA6NMD2 632 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 STXBP3O00186 592 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 NEBLO76041 1014 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FGGP02679 453 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 BCRP11274 1271 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CD19P15391 556 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ABCB5Q2M3G0 1257 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 USP37Q86T82 979 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CCDC13Q8IYE1 715 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 RAD54LQ92698 747 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 LTN1O94822 1766 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 STX2P32856 288 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SMTNP53814 917 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CDKAL1Q5VV42 579 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 DCUN1D2Q6PH85 259 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 GIMAP8Q8ND71 665 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 VPS37BQ9H9H4 285 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 LCMT1Q9UIC8 334 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SFI1A8K8P3 1242 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 DAPK3O43293 454 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 GAS8O95995 478 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 POLR2MP0CAP2 368 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 CCDC93Q567U6 631 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 MCTP2Q6DN12 878 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 FMNL3Q8IVF7 1028 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 KCNV2Q8TDN2 545 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 MICAL1Q8TDZ2 1067 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 ZNF653Q96CK0 615 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 BSDC1Q9NW68 430 aaPredicted RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 NR3C1P04150 777 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 TMOD1P28289 359 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 NLRP14Q86W24 1093 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SPATS2Q86XZ4 545 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 NSUN4Q96CB9 384 aaKnown RBP5.02□□□□□ -1.61
VPS13C-201ENST00000249837 AGXT2Q9BYV1 514 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 SH3GLB2Q9NR46 395 aa5.02□□□□□ -1.61
VPS13C-201ENST00000249837 LIN9Q5TKA1 542 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 LRRC31Q6UY01 552 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 SALL1Q9NSC2 1324 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 BAZ2AQ9UIF9 1905 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 CITO14578 2027 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TRIM68Q6AZZ1 485 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MIER3Q7Z3K6 550 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 CEP63Q96MT8 703 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 PCDHB4Q9Y5E5 795 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 THAP12O43422 761 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 SUN1O94901 812 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MTA3Q9BTC8 594 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TNNI1P19237 187 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 HERVK_113P62684 666 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TROAPQ12815 778 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 HIBCHQ6NVY1 386 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 FNBP1Q96RU3 617 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 RNF14Q9UBS8 474 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 NMT1P30419 496 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 OGFOD1Q8N543 542 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 PAF1Q8N7H5 531 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 NEDD1Q8NHV4 660 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 PASKQ96RG2 1323 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 BMP3P12645 472 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 ALAS1P13196 640 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MKRN4PQ13434 485 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 SF3B2Q13435 895 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 PPP2R5EQ16537 467 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms