RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZNF746Q6NUN9 644 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 MAEAQ7L5Y9 396 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 CEP170P1Q96L14 293 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 SUGCTQ9HAC7 445 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 XPNPEP3Q9NQH7 507 aa12.44□□□□□ -0.42
TNFAIP3-201ENST00000237289 XRCC5P13010 732 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 TOB1P50616 345 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 PSMC5P62195 406 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 JPH2Q9BR39 696 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 USP25Q9UHP3 1055 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 GINS2Q9Y248 185 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 POLGP54098 1239 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 TLK2Q86UE8 772 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 PCSK9Q8NBP7 692 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 SMARCE1Q969G3 411 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 DYDC2Q96IM9 177 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 BECN2A8MW95 431 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 M0QZ92 97 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 KIF20AO95235 890 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 GNAT1P11488 350 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 ITGB5P18084 799 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 ACTR2P61160 394 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 OLFML2BQ68BL8 750 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 C7orf31Q8N865 590 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 MAP7D2Q96T17 732 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 SENP7Q9BQF6 1050 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 EXOC1Q9NV70 894 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 FOCADQ5VW36 1801 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 CDK5RAP2Q96SN8 1893 aa12.43□□□□□ -0.42
TNFAIP3-201ENST00000237289 EXOC8Q8IYI6 725 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 RDM1Q8NG50 284 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 INPP4AQ96PE3 977 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 A0A1W2PQ27 194 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 A0A1W2PQ64 194 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 A0A1W2PQD8 194 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 OPLAHO14841 1288 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZNF202O95125 648 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 INHAP05111 366 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 PFKFB1P16118 471 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 TBC1D8BQ0IIM8 1120 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 PKN2Q16513 984 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 MTERF2Q49AM1 385 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 RETREG2Q8NC44 543 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 GLT1D1Q96MS3 346 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 TCF7P36402 384 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 MRPS9P82933 396 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 PTCH2Q9Y6C5 1203 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 CYP3A7-CYP3A51PA0A087WV96 503 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 SPATA31C2B4DYI2 1134 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 IBSPP21815 317 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 UBA1P22314 1058 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 CYP3A7P24462 503 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 MORN1Q5T089 497 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 SH3TC2Q8TF17 1288 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 LXNQ9BS40 222 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 RMND1Q9NWS8 449 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 DACH1Q9UI36 760 aa12.42□□□□□ -0.42
TNFAIP3-201ENST00000237289 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 RSPH3Q86UC2 560 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 NAT10Q9H0A0 1025 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 SMTNP53814 917 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 TNFRSF25Q93038 417 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 UNC45AQ9H3U1 944 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 ERAP1Q9NZ08 941 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 RGL1Q9NZL6 768 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 KPNA6O60684 536 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 NPY5RQ15761 445 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 DUSP28Q4G0W2 176 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 LARP4BQ92615 738 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 NRBP1Q9UHY1 535 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
TNFAIP3-201ENST00000237289 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 SEPT4O43236 478 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 USO1O60763 962 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.423e-6■□□□□ 10.5
TNFAIP3-201ENST00000237289 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 FAM102BQ5T8I3 360 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 DYMQ7RTS9 669 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 PIGOQ8TEQ8 1089 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 COPS5Q92905 334 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 TUFT1Q9NNX1 390 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 STK17AQ9UEE5 414 aa12.4□□□□□ -0.42
TNFAIP3-201ENST00000237289 GADD45BO75293 160 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms