RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KCTD17Q8N5Z5 321 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 KIAA0895Q8NCT3 520 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 NELFBQ8WX92 580 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 HPS3Q969F9 1004 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MOV10L1Q9BXT6 1211 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MYH11P35749 1972 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CELF2O95319 508 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 IDEP14735 1019 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 GPBP1Q86WP2 473 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 DYDC2Q96IM9 177 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 INPP4AQ96PE3 977 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 RBPJLQ9UBG7 517 aa21.94■■□□□ 1.1
TNFRSF1A-201ENST00000162749 COBLO75128 1261 aa21.93■■□□□ 1.1
TNFRSF1A-201ENST00000162749 NCAPG2Q86XI2 1143 aa21.93■■□□□ 1.1
TNFRSF1A-201ENST00000162749 SYT2Q8N9I0 419 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-201ENST00000162749 BMP2KQ9NSY1 1161 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-201ENST00000162749 ASTN1O14525 1302 aa21.93■■□□□ 1.1
TNFRSF1A-201ENST00000162749 PFASO15067 1338 aa21.93■■□□□ 1.1
TNFRSF1A-201ENST00000162749 ATP9AO75110 1047 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 RGS20O76081 388 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 SERPINC1P01008 464 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 OSBPP22059 807 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 STIM1Q13586 685 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 EPHA7Q15375 998 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 ARSHQ5FYA8 562 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 TPH2Q8IWU9 490 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MS4A4AQ96JQ5 239 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 GTPBP4Q9BZE4 634 aaKnown RBP21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 TBC1D22BQ9NU19 505 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MCM3APO60318 1980 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CNTN2Q02246 1040 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 DNTTIP2Q5QJE6 756 aaKnown RBP21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CDKAL1Q5VV42 579 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 DNERQ8NFT8 737 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 GPRASP2Q96D09 838 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 BHMT2Q9H2M3 363 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 R3HDMLQ9H3Y0 253 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 SLC39A2Q9NP94 309 aa21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 WRAP73Q9P2S5 460 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF1A-201ENST00000162749 PSMA7O14818 248 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 ERCC3P19447 782 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MUTP22033 750 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 UBASH3AP57075 661 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 COBLL1Q53SF7 1204 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 C2orf69Q8N8R5 385 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CACTINQ8WUQ7 758 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 NPHP3-ACAD11A0A0J9YXS1 232 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 TRIM49BA6NDI0 452 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CDK11BP21127 795 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 PMS1P54277 932 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 PIGOQ8TEQ8 1089 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 ZNF526Q8TF50 670 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 LXNQ9BS40 222 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 LRRC37A2A6NM11 1700 aa21.91■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MYH9P35579 1960 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 UQCRHLA0A096LP55 91 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 EYA4O95677 639 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 UQCRHP07919 91 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 COASYQ13057 564 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MKRN3Q13064 507 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 Q3C1V9 767 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MIER3Q7Z3K6 550 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 MAFGO15525 162 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 SLC25A27O95847 323 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CYP2C8P10632 490 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 CACNB1Q02641 598 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 RAD51AP2Q09MP3 1159 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 NLRX1Q86UT6 975 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 DHTKD1Q96HY7 919 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 IWS1Q96ST2 819 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 PANK4Q9NVE7 773 aa21.9■■□□□ 1.1
TNFRSF1A-201ENST00000162749 FRMD3A2A2Y4 597 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ZBTB39O15060 712 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 STAM2O75886 525 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CETPP11597 493 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PPP1R2P41236 205 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 GTF2A2P52657 109 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PSMD2Q13200 908 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 TPD52L1Q16890 204 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 BANK1Q8NDB2 785 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 NEK9Q8TD19 979 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 PNMA3Q9UL41 463 aa21.89■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SOCS7O14512 581 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CST9Q5W186 159 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CCL15-CCL14A0A0B4J2E2 113 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CBFA2T2O43439 604 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ITGBL1O95965 494 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 KRT18P05783 430 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ALDH5A1P51649 535 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 ARID5BQ14865 1188 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CCL15Q16663 113 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 TTI2Q6NXR4 508 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 APTXQ7Z2E3 356 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 CCDC65Q8IXS2 484 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 GLIS3Q8NEA6 775 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 REEP2Q9BRK0 252 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 RUSC1Q9BVN2 902 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 INTS13Q9NVM9 706 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 SAMM50Q9Y512 469 aa21.88■■□□□ 1.09
TNFRSF1A-201ENST00000162749 FSTL1Q12841 308 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms