RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Msl3Q9WVG9 525 aa17.43■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Pbx2O35984 430 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Hoxc8P09025 242 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Rit2P70425 217 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Eif3j1Q3UGC7 261 aaKnown RBP17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Slc9a1Q61165 820 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Trim37Q6PCX9 961 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Krt9Q6RHW0 743 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Cdca8Q8BHX3 289 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Azin2Q8BVM4 459 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Neu4Q8BZL1 478 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 4933409G03RikQ8C5U0 320 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Nrbp2Q91V36 499 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Grin3bQ91ZU9 1003 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Rab30Q923S9 203 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Spred2Q924S7 410 aa17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gys1Q9Z1E4 738 aaKnown RBP17.42■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Klhl34A2AI76 644 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Il2rbP16297 539 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Dnm1P39053 867 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Cd86P42082 309 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Syt1P46096 421 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Mief2Q5NCS9 454 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Dennd2aQ8C4S8 1000 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Tsr2Q8C8T8 191 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Mknk2Q8CDB0 459 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Agbl3Q8CDP0 1006 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Hs2st1Q8R3H7 356 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 CutaQ9CQ89 177 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Ccdc7Q9D541 371 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Nudt5Q9JKX6 218 aa17.41■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gm12800B1AUV4 484 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gm4788E9Q8B5 879 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Gm12794L7MTS5 483 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Dhx15O35286 795 aaKnown RBP17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 FosbP13346 338 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Cdc25aP48964 514 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 FanccP50652 591 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Lmntd2Q0VET5 664 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Icam5Q60625 917 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Krt87Q6IMF0 495 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 C6.1alQ7M757 291 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Tmem202Q80W35 275 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 PisdQ8BSF4 406 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 ClmnQ8C5W0 1052 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Tbc1d13Q8R3D1 400 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Plcb4Q91UZ1 1175 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Ccdc96Q9CR92 584 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Saal1Q9D2C2 474 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Etnk1Q9D4V0 363 aa17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Myh9Q8VDD5 1960 aaKnown RBP17.4■□□□□ 0.38
Hmgb1-208ENSMUST00000139443 Akap17bA2A3V1 959 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Ankrd16A2AS55 361 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Pcdha4O88689 947 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Cdc6O89033 562 aaKnown RBP17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Mcm3P25206 812 aaKnown RBP17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Fam89aQ14BJ1 175 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Defb25Q30KN8 71 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Hhla1Q3TYV2 514 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Lrrc55Q3UY51 311 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 P3h1Q3V1T4 739 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Nlrp2Q4PLS0 1046 aaKnown RBP17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Tmem199Q5SYH2 208 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Crtc1Q68ED7 630 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 1700010I14RikQ7TPG0 532 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Olfr397Q8VEZ6 315 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 CrygnQ8VHL5 183 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Terf2ipQ91VL8 393 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Tas1r3Q925D8 858 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 TtpalQ9D3D0 343 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Lrrc46Q9DAP0 323 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Mkrn2Q9ERV1 416 aaKnown RBP17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Fmnl1Q9JL26 1094 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Cnpy2Q9QXT0 182 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Wnt8bQ9WUD6 350 aa17.39■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Svs3aF2Z472 265 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Lrrc32G3XA59 663 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Hcn4O70507 1186 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Mpp3O88910 568 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Znf280dQ68FE8 974 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Fam214aQ69ZK7 1075 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Ccdc189Q6NZQ0 333 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Ush1gQ80T11 461 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 F13a1Q8BH61 732 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Fam49aQ8BHZ0 323 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Ppfibp1Q8C8U0 969 aaKnown RBP17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Sept8Q8CHH9 429 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Mettl5Q8K1A0 209 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Prrg2Q8R182 198 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Adcy3Q8VHH7 1145 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Med24Q99K74 987 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Akirin1Q99LF1 191 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Mtmr9Q9Z2D0 545 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Gm45861A0A1B0GRY3 1923 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Zfp804bA0A0G2JGH6 1343 aa17.38■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Rp1l1Q8CGM2 1859 aa17.37■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Col4a3Q9QZS0 1669 aa17.37■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Esr2O08537 530 aa17.37■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Tulp2P46686 562 aa17.37■□□□□ 0.37
Hmgb1-208ENSMUST00000139443 Yap1P46938 488 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms