RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Dydc1Q9D9T0 175 aa14.17□□□□□ -0.14
Nup88-203ENSMUST00000108531 ArcQ9WV31 396 aa14.17□□□□□ -0.14
Nup88-203ENSMUST00000108531 Slurp2P0DP59 97 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Rps6ka1P18653 724 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Nr2f2P43135 414 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 PltpP55065 493 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Dpcr1Q3TNW5 500 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Skap1Q3UUV5 355 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 PigsQ6PD26 555 aaKnown RBP14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Ublcp1Q8BGR9 318 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Fam177a1Q8BR63 207 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Il17cQ8K4C5 194 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Scn9aQ62205 1984 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Gna15P30678 374 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Stat3P42227 770 aaKnown RBP14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Tlr8P58682 1032 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Wdhd1P59328 1117 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Sema3eP70275 775 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Slc2a13Q3UHK1 637 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Kctd1Q5M956 257 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 GnptabQ69ZN6 1235 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Dhx37Q6NZL1 1150 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Rbm26Q6NZN0 1012 aaKnown RBP14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Q6PD19 689 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Actn1Q7TPR4 892 aaKnown RBP14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Klhl7Q8BUL5 586 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 GzmnQ920S1 248 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Tbx18Q9EPZ6 613 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Slc40a1Q9JHI9 570 aa14.16□□□□□ -0.14
Nup88-203ENSMUST00000108531 Gm28510A0A087WP28 240 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Mroh8E9PYI4 1049 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Nfxl1E9Q8I7 918 aaKnown RBP14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Ppfibp2O35711 882 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Becn2P0DM65 447 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Rnpc3Q3UZ01 514 aaKnown RBP14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Mybpc2Q5XKE0 1136 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 KaznQ69ZS8 779 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 SugctQ7TNE1 436 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Ppp1r3aQ99MR9 1089 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Ndufab1Q9CR21 156 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 RpainQ9CWY9 219 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Pcdha4O88689 947 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Gap43P06837 227 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Hspa9P38647 679 aaKnown RBP14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Glg1Q61543 1175 aaKnown RBP14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Pcdhb5Q91XZ5 792 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Arfgap2Q99K28 520 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Txnrd3Q99MD6 652 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Capn9Q9D805 690 aa14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Add1Q9QYC0 735 aaKnown RBP14.15□□□□□ -0.14
Nup88-203ENSMUST00000108531 Usp4P35123 962 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Pcif1P59114 706 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Cyp2e1Q05421 493 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Nlrp4cQ3TKR3 982 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ggt6Q6PDE7 497 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 GopcQ8BH60 463 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Kiaa1024Q8K3V7 917 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Bzw2Q91VK1 419 aaKnown RBP14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Calml4Q91WQ9 153 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Stx17Q9D0I4 301 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Zbed3Q9D0L1 228 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 2310002L09RikQ9D7L5 217 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Sept14Q9DA97 430 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Gtf2iQ9ESZ8 998 aaKnown RBP14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Trim43cP86449 446 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Rasip1Q3U0S6 961 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Sin3bQ62141 1098 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Haus1Q8BHX1 278 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Gpr180Q8BPS4 441 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 CbsQ91WT9 561 aa14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ascc1Q9D8Z1 356 aaKnown RBP14.14□□□□□ -0.15
Nup88-203ENSMUST00000108531 ChkbO55229 394 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 AurkbO70126 345 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Mpp3O88910 568 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Vcam1P29533 739 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Nedd1P33215 660 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 ProcP33587 460 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Qrich1Q3UA37 777 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Mettl14Q3UIK4 456 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Klhdc9Q3USL1 350 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Rsad1Q5SUV1 442 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Mcf2lQ64096 1149 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Tm4sf1Q64302 202 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Hdac10Q6P3E7 666 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Naa35Q6PHQ8 725 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Nup58Q8R332 587 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Golph3Q9CRA5 298 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ears2Q9CXJ1 523 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 SetQ9EQU5 289 aaKnown RBP14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Gdf11Q9Z1W4 405 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Ttll10A4Q9F3 704 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Mmp15O54732 657 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Atp6v0a2P15920 856 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Mcm5P49718 733 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Klra9Q2TJJ8 266 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Hdgfl1Q2VPR5 283 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Wdr70Q3TWF6 657 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Tbc1d9bQ5SVR0 1263 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Chtf18Q8BIW9 969 aa14.13□□□□□ -0.15
Nup88-203ENSMUST00000108531 Rassf2Q8BMS9 326 aa14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms