RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W EKI1Q03764 534 aa2□□□□□ -2.09
RTT107YHR154W RRB1Q04225 511 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W YSH1Q06224 779 aaPredicted RBP2□□□□□ -2.09
RTT107YHR154W BCP1Q06338 283 aa2□□□□□ -2.09
RTT107YHR154W PRS5Q12265 496 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W YBR255C-AQ3E776 120 aa2□□□□□ -2.09
RTT107YHR154W ACC1Q00955 2233 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W GAL4P04386 881 aa2□□□□□ -2.09
RTT107YHR154W LEU4P06208 619 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W GPA1P08539 472 aa2□□□□□ -2.09
RTT107YHR154W PMI40P29952 429 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W FAA1P30624 700 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W NDI1P32340 513 aa2□□□□□ -2.09
RTT107YHR154W HIR2P32480 875 aa2□□□□□ -2.09
RTT107YHR154W DEF1P35732 738 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W MIC60P36112 540 aa2□□□□□ -2.09
RTT107YHR154W APL3P38065 1025 aa2□□□□□ -2.09
RTT107YHR154W RFS1P38234 210 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W CBR1P38626 284 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W MMS21P38632 267 aa2□□□□□ -2.09
RTT107YHR154W DIA4P38705 446 aaPredicted RBP2□□□□□ -2.09
RTT107YHR154W YNG2P38806 282 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W ANS1P38832 159 aa2□□□□□ -2.09
RTT107YHR154W CIN4P39110 191 aa2□□□□□ -2.09
RTT107YHR154W BNA6P43619 295 aa2□□□□□ -2.09
RTT107YHR154W APT1P49435 187 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W COQ6P53318 479 aa2□□□□□ -2.09
RTT107YHR154W BUD17P53727 317 aa2□□□□□ -2.09
RTT107YHR154W RSM23Q01163 450 aa2□□□□□ -2.09
RTT107YHR154W INA17Q02888 182 aa2□□□□□ -2.09
RTT107YHR154W FIN1Q03898 291 aa2□□□□□ -2.09
RTT107YHR154W HMO1Q03973 246 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W BUR2Q05949 395 aa2□□□□□ -2.09
RTT107YHR154W IZH3Q07959 543 aa2□□□□□ -2.09
RTT107YHR154W IRC13Q08630 104 aa2□□□□□ -2.09
RTT107YHR154W MED4Q12343 284 aa2□□□□□ -2.09
RTT107YHR154W DFG16Q99234 619 aa2□□□□□ -2.09
RTT107YHR154W QCR6P00127 147 aa1.99□□□□□ -2.09
RTT107YHR154W COR1P07256 457 aa1.99□□□□□ -2.09
RTT107YHR154W PUT2P07275 575 aa1.99□□□□□ -2.09
RTT107YHR154W PAD1P33751 242 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
RTT107YHR154W SHP1P34223 423 aa1.99□□□□□ -2.09
RTT107YHR154W BMH2P34730 273 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W YKL070WP36087 169 aa1.99□□□□□ -2.09
RTT107YHR154W ASN2P49090 572 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W SPC98P53540 846 aa1.99□□□□□ -2.09
RTT107YHR154W COP1P53622 1201 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W YNL247WP53852 767 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W MRP51Q02950 344 aa1.99□□□□□ -2.09
RTT107YHR154W DLT1Q04216 342 aa1.99□□□□□ -2.09
RTT107YHR154W CUR1Q06469 252 aa1.99□□□□□ -2.09
RTT107YHR154W RTT109Q07794 436 aa1.99□□□□□ -2.09
RTT107YHR154W YLL007CQ07799 665 aa1.99□□□□□ -2.09
RTT107YHR154W GSH2Q08220 491 aa1.99□□□□□ -2.09
RTT107YHR154W NRT1Q08485 598 aa1.99□□□□□ -2.09
RTT107YHR154W YLR049CQ12110 428 aa1.99□□□□□ -2.09
RTT107YHR154W GAL3P13045 520 aa1.99□□□□□ -2.09
RTT107YHR154W SAG1P20840 650 aa1.99□□□□□ -2.09
RTT107YHR154W EMP70P32802 667 aa1.99□□□□□ -2.09
RTT107YHR154W ALP1P38971 573 aa1.99□□□□□ -2.09
RTT107YHR154W PLB1P39105 664 aa1.99□□□□□ -2.09
RTT107YHR154W ELO1P39540 310 aa1.99□□□□□ -2.09
RTT107YHR154W YJL070CP40361 888 aa1.99□□□□□ -2.09
RTT107YHR154W URM1P40554 99 aaPredicted RBP1.99□□□□□ -2.09
RTT107YHR154W BNA3P47039 444 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W YGR151CP53287 111 aa1.99□□□□□ -2.09
RTT107YHR154W UTP6Q02354 440 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W CAB5Q03941 241 aa1.99□□□□□ -2.09
RTT107YHR154W COQ9Q05779 260 aa1.99□□□□□ -2.09
RTT107YHR154W ADE13Q05911 482 aaKnown RBP1.99□□□□□ -2.09
RTT107YHR154W YPR1Q12458 312 aa1.99□□□□□ -2.09
RTT107YHR154W ADF1Q2V2Q1 113 aa1.99□□□□□ -2.09
RTT107YHR154W CDC36P06100 191 aaPredicted RBP1.98□□□□□ -2.09
RTT107YHR154W RNR2P09938 399 aaKnown RBP1.98□□□□□ -2.09
RTT107YHR154W RSR1P13856 272 aa1.98□□□□□ -2.09
RTT107YHR154W UGA1P17649 471 aa1.98□□□□□ -2.09
RTT107YHR154W KAR4P25583 335 aa1.98□□□□□ -2.09
RTT107YHR154W CTP1P38152 299 aa1.98□□□□□ -2.09
RTT107YHR154W SUL1P38359 859 aa1.98□□□□□ -2.09
RTT107YHR154W PIH1P38768 344 aa1.98□□□□□ -2.09
RTT107YHR154W CIN1P40987 1014 aa1.98□□□□□ -2.09
RTT107YHR154W VOA1P53262 265 aa1.98□□□□□ -2.09
RTT107YHR154W PET117Q02771 107 aa1.98□□□□□ -2.09
RTT107YHR154W YDR541CQ03049 344 aa1.98□□□□□ -2.09
RTT107YHR154W TAF12Q03761 539 aa1.98□□□□□ -2.09
RTT107YHR154W VPS20Q04272 221 aa1.98□□□□□ -2.09
RTT107YHR154W SSQ1Q05931 657 aaPredicted RBP1.98□□□□□ -2.09
RTT107YHR154W SPO24Q3E752 67 aa1.98□□□□□ -2.09
RTT107YHR154W YKL033W-AQ86ZR7 236 aa1.98□□□□□ -2.09
RTT107YHR154W YLL053CP0CD98 152 aa1.98□□□□□ -2.09
RTT107YHR154W SAM2P19358 384 aaKnown RBP1.98□□□□□ -2.09
RTT107YHR154W RHB1P25378 209 aa1.98□□□□□ -2.09
RTT107YHR154W YCR016WP25617 290 aaKnown RBP1.98□□□□□ -2.09
RTT107YHR154W CNE1P27825 502 aa1.98□□□□□ -2.09
RTT107YHR154W CDC5P32562 705 aa1.98□□□□□ -2.09
RTT107YHR154W SRB4P32569 687 aa1.98□□□□□ -2.09
RTT107YHR154W GDA1P32621 518 aa1.98□□□□□ -2.09
RTT107YHR154W RAD23P32628 398 aaKnown RBP1.98□□□□□ -2.09
RTT107YHR154W REC114P32841 428 aa1.98□□□□□ -2.09
RTT107YHR154W DRE2P36152 348 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms