RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	BCH1	Q05029	724 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	SWA2	Q06677	668 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	VCX1	Q99385	411 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	STE3	P06783	470 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	FBA1	P14540	359 aa	Known RBP	4.53	□□□□□ -1.68
SUP35	YDR172W	CLN2	P20438	545 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	EMC3	P36039	253 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	YKR073C	P36153	106 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	YHL012W	P38709	493 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	SER33	P40510	469 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	AZF1	P41696	914 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	COG7	P53195	279 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	SWC4	P53201	476 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	YGR015C	P53208	328 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	SFB2	P53953	876 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	IDP3	P53982	420 aa	Known RBP	4.53	□□□□□ -1.68
SUP35	YDR172W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
SUP35	YDR172W	RPN5	Q12250	445 aa	Known RBP	4.53	□□□□□ -1.68
SUP35	YDR172W	YPR011C	Q12251	326 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	RGT2	Q12300	763 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	WTM1	Q12363	437 aa	Known RBP	4.53	□□□□□ -1.68
SUP35	YDR172W	GTT2	Q12390	233 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	SRN2	Q99176	213 aa		4.53	□□□□□ -1.68
SUP35	YDR172W	CPA1	P07258	411 aa	Known RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	UNG1	P12887	359 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	CBS2	P14905	389 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	BET2	P20133	325 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	DPB2	P24482	689 aa	Predicted RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	SEC17	P32602	292 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	PET112	P33893	541 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YKR015C	P36111	568 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YEL073C	P39974	107 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	RIC1	P40395	1056 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YJR030C	P47101	745 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YNR068C	P53754	272 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YNL260C	P53846	198 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	TLG1	Q03322	224 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	ARX1	Q03862	593 aa	Known RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	MFG1	Q07684	458 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YLL007C	Q07799	665 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	RSA1	Q08932	381 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YOL159C-A	Q3E769	90 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	MHF2	Q3E829	80 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YCL012C	Q8J0M4	134 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	CBP2	P03874	630 aa	Predicted RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	ATP4	P05626	244 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	TRX3	P25372	127 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	IMG2	P25642	146 aa	Predicted RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	RFA2	P26754	273 aa	Known RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	HXT4	P32467	576 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	MKK2	P32491	506 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	GMH1	P36125	273 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	INM1	P38710	295 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	HXT6	P39003	570 aa	Known RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	HXT7	P39004	570 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	SPF1	P39986	1215 aa	Known RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	YEL020C	P39994	560 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	GCN20	P43535	752 aa	Known RBP	4.52	□□□□□ -1.69
SUP35	YDR172W	AIM22	P47051	409 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	SED5	Q01590	340 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	NDL1	Q06568	189 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	ARR1	Q06596	294 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	RTT10	Q08924	1013 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	YDR056C	Q12025	205 aa		4.52	□□□□□ -1.69
SUP35	YDR172W	RSR1	P13856	272 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	CDC34	P14682	295 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	IDH2	P28241	369 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	APE2	P32454	952 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	HBS1	P32769	611 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	YKL097C	P34245	136 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	YPT52	P36018	234 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	YCR087C-A	P37263	153 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	CBP4	P37267	147 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	IML3	P38265	245 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	ATG14	P38270	344 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	RCK1	P38622	512 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	SSZ1	P38788	538 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	THO1	P40040	218 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	OSW5	P40219	148 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	MSS2	P40990	351 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	PFA3	P42836	336 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	YFR018C	P43599	363 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	PMT4	P46971	762 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	YJR149W	P47177	404 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	ATP22	P50273	684 aa	Predicted RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	MDM34	P53083	459 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	MPS2	P53159	387 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	NPY1	P53164	384 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	IRC15	Q02733	499 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	CCE1	Q03702	353 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	VHS1	Q03785	461 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	ATG10	Q07879	167 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	PUS7	Q08647	676 aa	Known RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	RRP42	Q12277	265 aa	Predicted RBP	4.51	□□□□□ -1.69
SUP35	YDR172W	MPD2	Q99316	277 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	Q0010	Q9ZZX9	128 aa		4.51	□□□□□ -1.69
SUP35	YDR172W	RPS14A	P06367	137 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	PPZ1	P26570	692 aa		4.5	□□□□□ -1.69
SUP35	YDR172W	SSE2	P32590	693 aa	Known RBP	4.5	□□□□□ -1.69
SUP35	YDR172W	PMT1	P33775	817 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms