RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 C7orf31Q8N865 590 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 KAT2BQ92831 832 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 BADQ92934 168 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 GPR20Q99678 358 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 TMEM260Q9NX78 707 aa16.25■□□□□ 0.19
SDHD-209ENST00000640554 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
SDHD-209ENST00000640554 H3BRB1 525 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 B4GALT4O60513 344 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 CIITAP33076 1130 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
SDHD-209ENST00000640554 PPIGQ13427 754 aaKnown RBP eCLIP16.24■□□□□ 0.19
SDHD-209ENST00000640554 MFSD10Q14728 455 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 KIAA0753Q2KHM9 967 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 BLIDQ8IZY5 108 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 SEPT1Q8WYJ6 367 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
SDHD-209ENST00000640554 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
SDHD-209ENST00000640554 ORC3Q9UBD5 711 aaPredicted RBP16.24■□□□□ 0.19
SDHD-209ENST00000640554 NOD1Q9Y239 953 aa16.24■□□□□ 0.19
SDHD-209ENST00000640554 ALPK3Q96L96 1907 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 ATP9AO75110 1047 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 PPFIA3O75145 1194 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 FPGSQ05932 587 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 CCDC155Q8N6L0 562 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 TNPO1Q92973 898 aaKnown RBP16.23■□□□□ 0.19
SDHD-209ENST00000640554 PGBD1Q96JS3 809 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 KIF2CQ99661 725 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
SDHD-209ENST00000640554 JPH1Q9HDC5 661 aaPredicted RBP16.23■□□□□ 0.19
SDHD-209ENST00000640554 TBC1D22BQ9NU19 505 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 DNAH12Q6ZR08 3092 aa16.23■□□□□ 0.19
SDHD-209ENST00000640554 KIAA1217Q5T5P2 1943 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 ST18O60284 1047 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 CTDNEP1O95476 244 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 LGALS2P05162 132 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 GNAT1P11488 350 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 BFSP2Q13515 415 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 LRIT3Q3SXY7 679 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 PLA2G4DQ86XP0 818 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 CYP2W1Q8TAV3 490 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 PHF20Q9BVI0 1012 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 NOC4LQ9BVI4 516 aaKnown RBP16.22■□□□□ 0.19
SDHD-209ENST00000640554 AGO4Q9HCK5 861 aaKnown RBP16.22■□□□□ 0.19
SDHD-209ENST00000640554 SLC9A2Q9UBY0 812 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 GTF2IRD1Q9UHL9 959 aa16.22■□□□□ 0.19
SDHD-209ENST00000640554 PARNO95453 639 aaKnown RBP16.21■□□□□ 0.19
SDHD-209ENST00000640554 ZNF286BP0CG31 522 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 ARP10275 920 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 ITGB8P26012 769 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 CHMP4BP1P59074 171 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 PTGISQ16647 500 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 MOXD1Q6UVY6 613 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 RPUSD2Q8IZ73 545 aaKnown RBP16.21■□□□□ 0.19
SDHD-209ENST00000640554 RETREG2Q8NC44 543 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
SDHD-209ENST00000640554 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 SMARCAD1Q9H4L7 1026 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 BCAS3Q9H6U6 928 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 BRMS1Q9HCU9 246 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 TRMT13Q9NUP7 481 aaKnown RBP16.21■□□□□ 0.19
SDHD-209ENST00000640554 HDAC6Q9UBN7 1215 aa16.21■□□□□ 0.19
SDHD-209ENST00000640554 IGLV3-22A0A075B6J6 115 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 FAM86B1E9PN63 330 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 M0R2N6 131 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 IPO5O00410 1097 aaKnown RBP16.2■□□□□ 0.18
SDHD-209ENST00000640554 SORBS3O60504 671 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 FAM86B2P0C5J1 330 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 RFC2P35250 354 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 TCF7P36402 384 aaPredicted RBP16.2■□□□□ 0.18
SDHD-209ENST00000640554 MCM2P49736 904 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 HMGN5P82970 282 aaKnown RBP16.2■□□□□ 0.18
SDHD-209ENST00000640554 TRIM29Q14134 588 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 NONOQ15233 471 aaKnown RBP eCLIP16.2■□□□□ 0.18
SDHD-209ENST00000640554 NAP1L4Q99733 375 aaKnown RBP16.2■□□□□ 0.18
SDHD-209ENST00000640554 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 ERAP1Q9NZ08 941 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 TCEAL9Q9UHQ7 104 aa16.2■□□□□ 0.18
SDHD-209ENST00000640554 CYP3A7-CYP3A51PA0A087WV96 503 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 CCDC194A0A1B0GVG4 234 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 ATG7O95352 703 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 PFKMP08237 780 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 FDPSP14324 419 aaKnown RBP16.19■□□□□ 0.18
SDHD-209ENST00000640554 CYP3A7P24462 503 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 CYP2C18P33260 490 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 SLC26A2P50443 739 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 PTK7Q13308 1070 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 NPY5RQ15761 445 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 GDF6Q6KF10 455 aaPredicted RBP16.19■□□□□ 0.18
SDHD-209ENST00000640554 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
SDHD-209ENST00000640554 PSRC1Q6PGN9 363 aaPredicted RBP16.19■□□□□ 0.18
SDHD-209ENST00000640554 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms