RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 GAP43P17677 238 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 IFRD2Q12894 506 aaPredicted RBP10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 MFSD14CQ5VZR4 134 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 CATSPER4Q7RTX7 472 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 THNSL1Q8IYQ7 743 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 DPF2Q92785 391 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 PAGE5Q96GU1 130 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 CNOT6LQ96LI5 555 aaKnown RBP10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 NACA2Q9H009 215 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 C1orf112Q9NSG2 853 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 RGL1Q9NZL6 768 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 ZKSCAN5Q9Y2L8 839 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 GDAQ9Y2T3 454 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 AK9Q5TCS8 1911 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 GNA14O95837 355 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 LMAN1P49257 510 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 JAK3P52333 1124 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 LMBR1Q8WVP7 490 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 DDX12PQ92771 950 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 GBP3Q9H0R5 595 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 GOLGA6L10A0A0M3HER8 536 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 GGPS1O95749 300 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 BACE1P56817 501 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 RNASE9P60153 205 aaKnown RBP10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 SPECC1LQ69YQ0 1117 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 DCUN1D2Q6PH85 259 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 FAM83AQ86UY5 434 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 AMIGO3Q86WK7 504 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 FAM186BQ8IYM0 893 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 NUP58Q9BVL2 599 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 CTTNBP2NLQ9P2B4 639 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 MAN1B1Q9UKM7 699 aa10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
KCNMA1-228ENST00000638223 C6orf222P0C671 652 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 STAT1P42224 750 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 QARSP47897 775 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 PPM1FP49593 454 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 FKBP3Q00688 224 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 TRIM14Q14142 442 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 GBP6Q6ZN66 633 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 P2RX5Q93086 422 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ACCSQ96QU6 501 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 METTL14Q9HCE5 456 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ASB14A6NK59 587 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 POLR2FP61218 127 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 RPS6P62753 249 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 KMT5BQ4FZB7 885 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 SFMBT2Q5VUG0 894 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 SYT10Q6XYQ8 523 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 RASGRP2Q7LDG7 609 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 TUBGCP2Q9BSJ2 902 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 SELENOOQ9BVL4 669 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ALDH8A1Q9H2A2 487 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 MYO1AQ9UBC5 1043 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ABL1P00519 1130 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 RNASELQ05823 741 aaKnown RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 CUL4BQ13620 913 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 LXNQ9BS40 222 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ZNF302Q9NR11 478 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 CNTNAP5Q8WYK1 1306 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 P4HA1P13674 534 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ABCB4P21439 1286 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 PRPHP41219 470 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 TMCO3Q6UWJ1 677 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 PSMB7Q99436 277 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 GPRC5DQ9NZD1 345 aa10.83□□□□□ -0.68
KCNMA1-228ENST00000638223 SALL1Q9NSC2 1324 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 CTAGE9A4FU28 777 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 SHMT1P34896 483 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 COPB2P35606 906 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 USP11P51784 963 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 IFFO1Q0D2I5 559 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 V9GYY5 206 aaPredicted RBP10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 STXBP3O00186 592 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 P4HBP07237 508 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 FDPSP14324 419 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 TAL1P17542 331 aaPredicted RBP10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 GAS2L3Q86XJ1 694 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 SFR1Q86XK3 245 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 ZBTB9Q96C00 473 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 LRFN2Q9ULH4 789 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
KCNMA1-228ENST00000638223 LPXNO60711 386 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms