RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 RSBN1LQ6PCB5 846 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 ACCSQ96QU6 501 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 PHKA1P46020 1223 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 PHLDB3Q6NSJ2 640 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 SIX6OS1Q8N1H7 587 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 GCKP35557 465 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 IREB2P48200 963 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 EXT2Q93063 718 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 ZFYVE19Q96K21 471 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 JPH2Q9BR39 696 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 SLC7A5P2Q9GIP4 190 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 UBE2TQ9NPD8 197 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 FANCLQ9NW38 375 aa17.27■□□□□ 0.36
CACNA1A-221ENST00000636012 EVI5O60447 810 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 ARL4AP40617 200 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 FAM26FQ5R3K3 315 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 PDXDC2PQ6P474 469 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 LMNB2Q03252 620 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 ELMOD1Q8N336 334 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 ADCY9O60503 1353 aa17.27■□□□□ 0.35
CACNA1A-221ENST00000636012 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 LONP1P36776 959 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 BASP1P80723 227 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 ANO4Q32M45 955 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 CCDC51Q96ER9 411 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 CAPN7Q9Y6W3 813 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 ZC3H12BQ5HYM0 836 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 LRRC41Q15345 812 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 ELMSAN1Q6PJG2 1045 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 PRPF38AQ8NAV1 312 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 PDCD6IPQ8WUM4 868 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 TBK1Q9UHD2 729 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 TBX22Q9Y458 520 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 PHKG2P15735 406 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 BRD2P25440 801 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 SGO2Q562F6 1265 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 ZBTB17Q13105 803 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 ERFEQ4G0M1 354 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 TMTC3Q6ZXV5 915 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 ANKRD13CQ8N6S4 541 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 SLC17A8Q8NDX2 589 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 GOLGA8KD6RF30 607 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 CHL1O00533 1208 aa17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 SMYD4Q8IYR2 804 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-221ENST00000636012 TOM1L1O75674 476 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 PYGLP06737 847 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 FAM49AQ9H0Q0 323 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 GCNT4Q9P109 453 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 TLK1Q9UKI8 766 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 GTPBP6O43824 516 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 CXCR5P32302 372 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 COA7Q96BR5 231 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 DIAPH2O60879 1101 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 IFNAR2P48551 515 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 BBOF1Q8ND07 529 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 H2AFZP0C0S5 128 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 NFX1Q12986 1120 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 FRA10AC1Q70Z53 315 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 H2AFVQ71UI9 128 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 HMGB1P1B2RPK0 211 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 UBE3AQ05086 875 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 KCTD16Q68DU8 428 aa17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 YWHAHQ04917 246 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 GPATCH4Q5T3I0 446 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-221ENST00000636012 WDR91A4D1P6 747 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 KRT1P04264 644 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 CIITAP33076 1130 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 NSUN2Q08J23 767 aaKnown RBP eCLIP17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 TMED2Q15363 201 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 TBC1D12O60347 775 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 MSH2P43246 934 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 TUBGCP2Q9BSJ2 902 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 PCDHA4Q9UN74 947 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 ART3Q13508 389 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 LARP4BQ92615 738 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 TPCN1Q9ULQ1 816 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 LEMD3Q9Y2U8 911 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 AFPP02771 609 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 SERPINB2P05120 415 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 SYDE2Q5VT97 1194 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 PIK3C2GO75747 1445 aa17.24■□□□□ 0.35
CACNA1A-221ENST00000636012 SEMA3EO15041 775 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms