RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 ULK4Q96C45 1275 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 ZSCAN10Q96SZ4 725 aaPredicted RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 PHLPP2Q6ZVD8 1323 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 AFPP02771 609 aaKnown RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 CCDC159P0C7I6 412 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 NNMTP40261 264 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 SERPINB10P48595 397 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 MRPL28Q13084 256 aaKnown RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 DYNC1I2Q13409 638 aaKnown RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 ZKSCAN8Q15776 578 aaPredicted RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 GPIHBP1Q8IV16 184 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 NEK9Q8TD19 979 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 STAMQ92783 540 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 CCDC17Q96LX7 622 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 AK8Q96MA6 479 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 ZNF215Q9UL58 517 aaPredicted RBP9.62□□□□□ -0.87
GABRB3-216ENST00000628124 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
GABRB3-216ENST00000628124 RPSAP08865 295 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TCF3P15923 654 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 GCFC2P16383 781 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CARSP49589 748 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ICA1Q05084 483 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ALCAMQ13740 583 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 MORF4L2Q15014 288 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CDC37Q16543 378 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CERKLQ49MI3 558 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ANKS3Q6ZW76 656 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 RAB42Q8N4Z0 105 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 GFM2Q969S9 779 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 DHTKD1Q96HY7 919 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ZBTB40Q9NUA8 1239 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 STMN3Q9NZ72 180 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ZFYVE9O95405 1425 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CHUKO15111 745 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 VAMP4O75379 141 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 SCG2P13521 617 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TRAPPC10P48553 1259 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ADCY2Q08462 1091 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 NR1H3Q13133 447 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 C6orf118Q5T5N4 469 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 KRT27Q7Z3Y8 459 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ABHD8Q96I13 439 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CALR3Q96L12 384 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 DIABLOQ9NR28 239 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 hCG_1984214I3L0E3 225 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 INO80B-WBP1J3KQ70 363 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ZNF197O14709 1029 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 MYL1P05976 194 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 GNL1P36915 607 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 INO80BQ9C086 356 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ABCF3Q9NUQ8 709 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TNNQ9UQP3 1299 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 APOBEC2Q9Y235 224 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 KRT38O76015 456 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 KIAA1755Q5JYT7 1200 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 GPATCH4Q5T3I0 446 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 ELMOD1Q8N336 334 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TBC1D19Q8N5T2 526 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 USP6NLQ92738 828 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TSC22D3Q99576 134 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 MYL10Q9BUA6 226 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 AMNQ9BXJ7 453 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CALN1Q9BXU9 219 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 KLC2Q9H0B6 622 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 YTHDC2Q9H6S0 1430 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 PLTPP55058 493 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TJAP1Q5JTD0 557 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 NAA35Q5VZE5 725 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 OR6B2Q6IFH4 312 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 EFHBQ8N7U6 833 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 CEP70Q8NHQ1 597 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 GJA10Q969M2 543 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 TMEM60Q9H2L4 133 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 KMT5AQ9NQR1 393 aa9.61□□□□□ -0.87
GABRB3-216ENST00000628124 NOP53Q9NZM5 478 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 FNDC3AQ9Y2H6 1198 aaKnown RBP9.61□□□□□ -0.87
GABRB3-216ENST00000628124 BAG6P46379 1132 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 COPB1P53618 953 aaKnown RBP9.6□□□□□ -0.87
GABRB3-216ENST00000628124 MFSD14BQ5SR56 506 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 ARHGAP18Q8N392 663 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 PYROXD1Q8WU10 500 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 TRIM54Q9BYV2 358 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 ATP6V0A4Q9HBG4 840 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 SYTL2Q9HCH5 934 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 SELENONQ9NZV5 590 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 KLRF2D3W0D1 207 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 SLFN14P0C7P3 912 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 CPA1P15085 419 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 RASSF7Q02833 373 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 C19orf44Q9H6X5 657 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 HPCAL4Q9UM19 191 aa9.6□□□□□ -0.87
GABRB3-216ENST00000628124 PCDHGB4Q9UN71 923 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms